; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006397 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006397
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor PAR2
Genome locationscaffold327:328806..329237
RNA-Seq ExpressionMS006397
SyntenyMS006397
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044549 - Transcription factor IBH1-like, bHLH domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449537.1 PREDICTED: transcription factor PAR2-like [Cucumis melo]2.3e-3268.22Show/hide
Query:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
        K  T  R K+L+LN LHKSS             HRR  R+    ++ I  K  RN  V T EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
Subjt:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI

Query:  MNLQHQVKAMRALSSFFETLEKEKSKCGG
        MNLQHQVKAMRALSSFFE+LEKEKS+CGG
Subjt:  MNLQHQVKAMRALSSFFETLEKEKSKCGG

XP_022147973.1 transcription factor PAR2 [Momordica charantia]1.5e-68100Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

XP_022930688.1 transcription factor PAR2-like [Cucurbita moschata]8.5e-3565.97Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        M ++ IQRLKLAIQ K  T PRHK+L+LN LHKS          +R+A RR   K +RIA               S +A+EKEAVERKIRALQ+IVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFE+LEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

XP_022989200.1 transcription factor PAR2-like [Cucurbita maxima]6.5e-3565.97Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        M ++ IQRLKLAIQ K  T PRHK+L+LN LHKS          +R+A RR   K +RIA               S +A+EKEAVERKIRALQ+IVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFE+LEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

XP_038887982.1 transcription factor PAR1-like [Benincasa hispida]1.4e-3267.36Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        M+++ IQ L      KP T  R K+L+LN LHKSS    RRSR      RR+   ++RIA    +K  RN  V  SEEADEKEAVERKIRALQSIVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFE+LEKEKS+CGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

TrEMBL top hitse value%identityAlignment
A0A1S3BM86 transcription factor PAR2-like1.1e-3268.22Show/hide
Query:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
        K  T  R K+L+LN LHKSS             HRR  R+    ++ I  K  RN  V T EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
Subjt:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI

Query:  MNLQHQVKAMRALSSFFETLEKEKSKCGG
        MNLQHQVKAMRALSSFFE+LEKEKS+CGG
Subjt:  MNLQHQVKAMRALSSFFETLEKEKSKCGG

A0A5A7V5C4 Transcription factor PAR2-like1.1e-3268.22Show/hide
Query:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
        K  T  R K+L+LN LHKSS             HRR  R+    ++ I  K  RN  V T EEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI
Subjt:  KPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYI

Query:  MNLQHQVKAMRALSSFFETLEKEKSKCGG
        MNLQHQVKAMRALSSFFE+LEKEKS+CGG
Subjt:  MNLQHQVKAMRALSSFFETLEKEKSKCGG

A0A6J1D2S3 transcription factor PAR27.4e-69100Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

A0A6J1EW23 transcription factor PAR2-like4.1e-3565.97Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        M ++ IQRLKLAIQ K  T PRHK+L+LN LHKS          +R+A RR   K +RIA               S +A+EKEAVERKIRALQ+IVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFE+LEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

A0A6J1JLR0 transcription factor PAR2-like3.1e-3565.97Show/hide
Query:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE
        M ++ IQRLKLAIQ K  T PRHK+L+LN LHKS          +R+A RR   K +RIA               S +A+EKEAVERKIRALQ+IVPGGE
Subjt:  MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGE

Query:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFE+LEKEKSKCGG
Subjt:  SLGVDKLFEQTAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

SwissProt top hitse value%identityAlignment
Q9LXR7 Transcription factor PAR24.7e-1238.06Show/hide
Query:  LAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQ
        LA     R++P   S  +NT   SS    RR+R      +R+   ++ +++T              +E +++E VE KI ALQ+IVPGG  LGVD LFE+
Subjt:  LAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQ

Query:  TAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        TA YI+ LQ Q+ A++ L++F E  EK+  K GG
Subjt:  TAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG

Q9SJH0 Transcription factor PAR18.9e-1140.71Show/hide
Query:  SSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGV-STSEEADEKE-AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        ++P + RRS +   +     R +    +T R+    N  V    EEA+E+E  V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF
Subjt:  SSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGV-STSEEADEKE-AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FETLEKEKSKCGG
         + +++E  K GG
Subjt:  FETLEKEKSKCGG

Arabidopsis top hitse value%identityAlignment
AT2G42870.1 phy rapidly regulated 16.3e-1240.71Show/hide
Query:  SSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGV-STSEEADEKE-AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF
        ++P + RRS +   +     R +    +T R+    N  V    EEA+E+E  V+ KI ALQ I+PGG +LGVD LFE+TA YI++LQ Q+K ++ L+SF
Subjt:  SSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGV-STSEEADEKE-AVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRALSSF

Query:  FETLEKEKSKCGG
         + +++E  K GG
Subjt:  FETLEKEKSKCGG

AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators8.2e-0441.3Show/hide
Query:  AVERKIRALQSIVPGGE-SLGVDKLFEQTAEYIMNLQHQVKAMRAL
        A+ R+++ L+ +VP  + S G+D LF QTA+YI+ L+ +VK M+ +
Subjt:  AVERKIRALQSIVPGGE-SLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.3e-0431.43Show/hide
Query:  IRQKERRNGGVSTSEEA----DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL
        + + +R+N  +ST  +       +E +  KIR LQ++VPGG  +    + ++ A Y+  L+ QVKA+  L
Subjt:  IRQKERRNGGVSTSEEA----DEKEAVERKIRALQSIVPGGESLGVDKLFEQTAEYIMNLQHQVKAMRAL

AT3G58850.1 phy rapidly regulated 23.3e-1338.06Show/hide
Query:  LAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQ
        LA     R++P   S  +NT   SS    RR+R      +R+   ++ +++T              +E +++E VE KI ALQ+IVPGG  LGVD LFE+
Subjt:  LAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQ

Query:  TAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG
        TA YI+ LQ Q+ A++ L++F E  EK+  K GG
Subjt:  TAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAACTCTAATTCAGAGACTGAAACTCGCCATTCAGGGGAAACCGAGAACCGCGCCTCGCCATAAATCCCTAATGCTCAACACATTGCACAAATCTTCTCCCGC
CTCTTTCCGCCGGAGCCGGACGCATCGCGACGCCCACCGCCGGATCGGGAGAAAATCGAGCCGCATTGCGAAGACGATTCGGCAGAAGGAGAGGCGAAACGGCGGCGTTT
CCACCTCCGAGGAAGCCGATGAGAAGGAGGCGGTGGAGCGGAAGATTCGCGCGCTGCAGAGCATTGTGCCTGGAGGGGAATCGCTCGGCGTCGACAAGCTATTTGAACAG
ACGGCTGAGTATATAATGAATTTGCAGCATCAGGTGAAGGCCATGAGAGCCCTCTCGAGCTTTTTCGAGACGTTGGAGAAGGAGAAAAGCAAGTGTGGAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAACTCTAATTCAGAGACTGAAACTCGCCATTCAGGGGAAACCGAGAACCGCGCCTCGCCATAAATCCCTAATGCTCAACACATTGCACAAATCTTCTCCCGC
CTCTTTCCGCCGGAGCCGGACGCATCGCGACGCCCACCGCCGGATCGGGAGAAAATCGAGCCGCATTGCGAAGACGATTCGGCAGAAGGAGAGGCGAAACGGCGGCGTTT
CCACCTCCGAGGAAGCCGATGAGAAGGAGGCGGTGGAGCGGAAGATTCGCGCGCTGCAGAGCATTGTGCCTGGAGGGGAATCGCTCGGCGTCGACAAGCTATTTGAACAG
ACGGCTGAGTATATAATGAATTTGCAGCATCAGGTGAAGGCCATGAGAGCCCTCTCGAGCTTTTTCGAGACGTTGGAGAAGGAGAAAAGCAAGTGTGGAGGT
Protein sequenceShow/hide protein sequence
MERTLIQRLKLAIQGKPRTAPRHKSLMLNTLHKSSPASFRRSRTHRDAHRRIGRKSSRIAKTIRQKERRNGGVSTSEEADEKEAVERKIRALQSIVPGGESLGVDKLFEQ
TAEYIMNLQHQVKAMRALSSFFETLEKEKSKCGG