; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006404 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006404
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationscaffold327:371089..375145
RNA-Seq ExpressionMS006404
SyntenyMS006404
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012049.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-22959.1Show/hide
Query:  GEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVTAII-----
        G++    KLFDKMP RNPISWNSMIGGYVRNGMFKEALKLFVKMQEE I+PSEF+MVSLLNAS  IGAL      +EY++K NLEL+  V TAII     
Subjt:  GEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVTAII-----

Query:  ------------------------------------------DMYCKCGSIVNALQVFEKMP------SRGL----SSWNSMIFGLAVNGCENEAILLFR
                                                  DM+ + G +  A Q+ + MP       RG+    +  N+ +   A        + L+R
Subjt:  ------------------------------------------DMYCKCGSIVNALQVFEKMP------SRGL----SSWNSMIFGLAVNGCENEAILLFR

Query:  MLE-------------SSSLEPDS-------ERVSMRMKNVEKEPG----GSLIEV--------------DGEVHEFIAGG------GRLHPKAQE-IYI
        M               + ++ PD         R +      +  P       L+ V                +   F+A         R  P  Q  +  
Subjt:  MLE-------------SSSLEPDS-------ERVSMRMKNVEKEPG----GSLIEV--------------DGEVHEFIAGG------GRLHPKAQE-IYI

Query:  VLDQLGRCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPS
         L +    T      ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+
Subjt:  VLDQLGRCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPS

Query:  IFEEFLPGGIGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGS
        IFEEFLPGGIGIQPHVRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG 
Subjt:  IFEEFLPGGIGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGS

Query:  GDTRALELVCWNNELATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIA
        G  +ALELVCW+NELATSVLEKMAAK +  S SKG+ ++FPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL P+SDESDKW+VAILHE LHML+ 
Subjt:  GDTRALELVCWNNELATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIA

Query:  KKIEKETILFIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDD
        KK EKET+L IGEYFGLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   TRQQK+E+KE SDD
Subjt:  KKIEKETILFIGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDD

Query:  ATRKENEAELLDSSDE-------------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRT
         + K+NEAEL +S DE             E E+ SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR N ++ RPS  RD KRER N SK   VRT
Subjt:  ATRKENEAELLDSSDE-------------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRT

Query:  KV
        KV
Subjt:  KV

XP_022147962.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]3.2e-26098.32Show/hide
Query:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGG
        MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYPSIFEEFLPGG
Subjt:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGG

Query:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
        IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISR HKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
Subjt:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV

Query:  CWNNELATSVLEKMAAKAETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILF
        CWNNELATSVLEKMAAKAET VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETIL 
Subjt:  CWNNELATSVLEKMAAKAETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILF

Query:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAEL
        IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGT QQKKEEKE+SDDATRKENEAEL
Subjt:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAEL

Query:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSRDVKRERLNNSKGYQVRTKV
        LDSSDEEAEDDSSNLNARADRKEAAGGRRRHV FQENVGRNRVRSSKRMNSTSGRPSRDVKRER NNSKGYQVRTKV
Subjt:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSRDVKRERLNNSKGYQVRTKV

XP_022952527.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita moschata]1.4e-20278.88Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGMPI+FPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL P+SDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   TRQQK+E+KE SDD + K+NEAEL +S D
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD

Query:  E---------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
        E         E E+ SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR N ++ RPS  RD KRER N SK   VRTKV
Subjt:  E---------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

XP_022969363.1 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X4 [Cucurbita maxima]1.3e-20078.67Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT +E   TRQQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS

Query:  --------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
                + E ED SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR NS++ RPS  RD KRER N SK Y VRTKV
Subjt:  --------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

XP_023554109.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita pepo subsp. pepo]8.8e-20276.97Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCW+NEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGM ++FPMK+SNGFEMDKKFKKWVDEWQKLPYISPYENA+HL P+SDESDKW+VAILHE LHMLI KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKED KTT+E   TRQQK+E+KE SDD + K+NEAEL +SSD
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD

Query:  E------------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS-----------RDVKRERLNNSKGYQVRTKV
        +            E ED SSN N +ADRKE  G  +R+V  +EN  R+R+RSSKR NS++ RPS           RD KRER N SK Y VRTKV
Subjt:  E------------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS-----------RDVKRERLNNSKGYQVRTKV

TrEMBL top hitse value%identityAlignment
A0A6J1D3S2 protein ROOT PRIMORDIUM DEFECTIVE 11.5e-26098.32Show/hide
Query:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGG
        MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYPSIFEEFLPGG
Subjt:  MFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGG

Query:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
        IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISR HKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV
Subjt:  IGIQPHVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELV

Query:  CWNNELATSVLEKMAAKAETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILF
        CWNNELATSVLEKMAAKAET VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETIL 
Subjt:  CWNNELATSVLEKMAAKAETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILF

Query:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAEL
        IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGT QQKKEEKE+SDDATRKENEAEL
Subjt:  IGEYFGLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAEL

Query:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSRDVKRERLNNSKGYQVRTKV
        LDSSDEEAEDDSSNLNARADRKEAAGGRRRHV FQENVGRNRVRSSKRMNSTSGRPSRDVKRER NNSKGYQVRTKV
Subjt:  LDSSDEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSRDVKRERLNNSKGYQVRTKV

A0A6J1GKN4 protein ROOT PRIMORDIUM DEFECTIVE 16.5e-20378.88Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+YQ E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGMPI+FPMK+SNGFEMDKKFKKWVDEWQKLPYISPY NA+HL P+SDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT+E   TRQQK+E+KE SDD + K+NEAEL +S D
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSD

Query:  E---------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
        E         E E+ SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR N ++ RPS  RD KRER N SK   VRTKV
Subjt:  E---------EAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

A0A6J1HW55 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X31.8e-20078.03Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT +E   TRQQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS

Query:  ------------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
                    + E ED SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR NS++ RPS  RD KRER N SK Y VRTKV
Subjt:  ------------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

A0A6J1HXK3 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X28.8e-20077.08Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT +E   TRQQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS

Query:  ------------------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
                          + E ED SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR NS++ RPS  RD KRER N SK Y VRTKV
Subjt:  ------------------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

A0A6J1I0R6 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X46.1e-20178.67Show/hide
Query:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH
        ++ +QQ H+F + +RTY DGTIKWVRDRGLDHAVEREKNLLPVMNIK+FIKSEPSKSVPVSIITQKREVLRIPTRPI LIRKYP+IFEEFLPGGIGIQPH
Subjt:  NQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPH

Query:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL
        VRLTSQVLELDAEEQL+ Q E CRQ+AAD+LVKLLM+SRVHKIPLSIIDQLKW+LGLPKDYVQSIVP+FPDYFKVVGHQNFASG G  +ALELVCWNNEL
Subjt:  VRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNEL

Query:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF
        ATSVLEKMAAK +  S SKGM I+FPM +SNGFEMDKKFKKWVDEWQKLPYISPYE+A+HL PSSDESDKW+VAILHE LHML+ KK EKET+L IGEYF
Subjt:  ATSVLEKMAAKAET-SVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYF

Query:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS
        GLRSRFKRALLHHPGIFYLSSK GTYTVVLKE YKRGSVIE+SPL+ IRNKYLHLMNTVKEDSKTT +E   TRQQK+E+KE SDD + K+NEAEL +SS
Subjt:  GLRSRFKRALLHHPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTT-TEQGGTRQQKKEEKEQSDDATRKENEAELLDSS

Query:  --------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV
                + E ED SSN N +ADRKE  G  +RHV  +EN  R+R+RSSKR NS++ RPS  RD KRER N SK Y VRTKV
Subjt:  --------DEEAEDDSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPS--RDVKRERLNNSKGYQVRTKV

SwissProt top hitse value%identityAlignment
Q38959 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic1.7e-3844.64Show/hide
Query:  VAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELN
        V+W +M+ G+    ++  +  +F++MP RN +SW +MI  YV+N    EA +LF +MQ + +KP+EFT+V+LL AS  +G+L  G W+H+Y  KN   L+
Subjt:  VAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELN

Query:  PIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLF-RMLESSSLEPDS
          + TA+IDMY KCGS+ +A +VF+ M  + L++WNSMI  L V+GC  EA+ LF  M E +S+EPD+
Subjt:  PIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLF-RMLESSSLEPDS

Q9FG16 Pentatricopeptide repeat-containing protein At5g065406.4e-3834.47Show/hide
Query:  DAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE
        D V+W SM+ G  KCG +  +R++FD+MP RN  +W+ MI GY +N  F++A+ LF  M+ E +  +E  MVS++++ AH+GAL  GE  +EY+ K+++ 
Subjt:  DAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE

Query:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSERVSMRMKNVEKEPGGSLIEVDGEVHEFIAG
        +N I+ TA++DM+ +CG I  A+ VFE +P     SW+S+I GLAV+G  ++A+  F  + S    P     +  +        G L+E   E++E +  
Subjt:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSERVSMRMKNVEKEPGGSLIEVDGEVHEFIAG

Query:  GGRLHPKAQEIYIVLDQLGRCTMFLLSRNQSQQQH
           + P+ +    ++D LGR      + N   + H
Subjt:  GGRLHPKAQEIYIVLDQLGRCTMFLLSRNQSQQQH

Q9LSB8 Putative pentatricopeptide repeat-containing protein At3g159304.1e-3744.64Show/hide
Query:  DAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE
        D ++W S++ G  + G +  +R  FD+MP R+ ISW  MI GY+R G F E+L++F +MQ   + P EFTMVS+L A AH+G+L  GEWI  YI+KN ++
Subjt:  DAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLE

Query:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPD
         + +V  A+IDMY KCG    A +VF  M  R   +W +M+ GLA NG   EAI +F  ++  S++PD
Subjt:  LNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPD

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic3.0e-5965.29Show/hide
Query:  FDAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL
        FD VAWNSMIMG AKCG I +++ LFD+MP+RN +SWNSMI G+VRNG FK+AL +F +MQE+ +KP  FTMVSLLNA A++GA  QG WIHEYI +N  
Subjt:  FDAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL

Query:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDS
        ELN IVVTA+IDMYCKCG I   L VFE  P + LS WNSMI GLA NG E  A+ LF  LE S LEPDS
Subjt:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDS

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial1.3e-5435.6Show/hide
Query:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA
        RTYVD  +KW RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     + T+  H +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA

Query:  EEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA
        +E++ YQ         D+L KL+++S+ + +PLSI+  +KW LGLP DY+Q     FPD   +     F       + L +     +   SVL+K A K 
Subjt:  EEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA

Query:  ETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHH
                 I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L PSSD ++K  V  LHELL + +    E++ +L + ++FGL  +  +A   H
Subjt:  ETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKE
        P IFYLS KN T T +L+E Y+  + +E  P++ +R KY+ LM   +   K+     G R +   +K+
Subjt:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKE

Arabidopsis top hitse value%identityAlignment
AT1G71850.1 Ubiquitin carboxyl-terminal hydrolase family protein7.1e-12552.68Show/hide
Query:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEEQLS
        V+ T K+VRDRGLDHAVEREKNL P+++IKD I+SEP+KSVP+S+IT +++ LR+P RPI  IR +PS+F+EFLPGGIGI PH+ LT ++L  DA+EQL 
Subjt:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEEQLS

Query:  YQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMA-AKAETSV
        Y  E  +Q  AD+L+KLLMI+R++KIPL I+D LKWDLGLPKDYV+++VP+FPDYF+V+        SG+   LELVCW+NE A SVLEK A    +   
Subjt:  YQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMA-AKAETSV

Query:  SKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHHPGIF
        +KG  I+FPMKFSNGF +DKK KKW+D+WQKLPYISPYENA HLS +SDESDKWA A+LHE++++ ++KK+EK+ IL +GE+ GLRSRFKR L +HPGIF
Subjt:  SKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHHPGIF

Query:  YLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKEN------------EAELLDSSDEEAED
        YLSSK  T+TVVL++GYKRG +IE++ L+  RN+Y+ LMNTVK+D+K  +       + K E E  D   + EN            + + +D  +++ E 
Subjt:  YLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKEN------------EAELLDSSDEEAED

Query:  DSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSR
        D +    R  R  +    RR      +  + + R SK    T  + SR
Subjt:  DSSNLNARADRKEAAGGRRRHVAFQENVGRNRVRSSKRMNSTSGRPSR

AT2G39120.1 Ubiquitin carboxyl-terminal hydrolase family protein9.1e-5635.6Show/hide
Query:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA
        RTYVD  +KW RD   D+   + R   L  V+++K+ I  EP++ +P+S I++K     + T+  H +RK+PSIFEEF+     + P  RLT +  ELD 
Subjt:  RTYVDGTIKWVRDRGLDHA--VEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDA

Query:  EEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA
        +E++ YQ         D+L KL+++S+ + +PLSI+  +KW LGLP DY+Q     FPD   +     F       + L +     +   SVL+K A K 
Subjt:  EEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKA

Query:  ETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHH
                 I FP+  S G  +  K + W+ E+QKLPY+SPY++ S L PSSD ++K  V  LHELL + +    E++ +L + ++FGL  +  +A   H
Subjt:  ETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHH

Query:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKE
        P IFYLS KN T T +L+E Y+  + +E  P++ +R KY+ LM   +   K+     G R +   +K+
Subjt:  PGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKE

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.1e-6065.29Show/hide
Query:  FDAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL
        FD VAWNSMIMG AKCG I +++ LFD+MP+RN +SWNSMI G+VRNG FK+AL +F +MQE+ +KP  FTMVSLLNA A++GA  QG WIHEYI +N  
Subjt:  FDAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNL

Query:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDS
        ELN IVVTA+IDMYCKCG I   L VFE  P + LS WNSMI GLA NG E  A+ LF  LE S LEPDS
Subjt:  ELNPIVVTAIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDS

AT4G24320.1 Ubiquitin carboxyl-terminal hydrolase family protein4.1e-8042.31Show/hide
Query:  RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEE
        RT+V+  +KWV D  LD AV+REKNL  V+++KD I S PSKS+P+S ++  + ++ +        +KYPS+F  F P       HVRLT Q L L  EE
Subjt:  RTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQPHVRLTSQVLELDAEE

Query:  QLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAET
        +  +     R     +L K LM++    +PL ++D+ ++DLGLP+DY+ S++ D+P+YF+V   ++  +G   T AL +    N L  S +E+  A  + 
Subjt:  QLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAKAET

Query:  S-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHHP
        S V KG+ I + M F  G+E+ K+ K WV++WQ LPYISPYENA HL   SD+++KWAVA+LHELL +L++KK E + ++ +GEY G   RFK+AL+HHP
Subjt:  S-VSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHHP

Query:  GIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKE
        GIFY+S K  T TVVL+E Y +  ++E  PL+ IR++Y++LM+      K     G  R  +K+
Subjt:  GIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKE

AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein3.1e-5637.39Show/hide
Query:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--TRPIHLIRKYPSIFEEFL---PGGIGIQPHVRLTSQVLELDA
        V+  +KWV+DR LD  V REK+L  V N+   I + P   +P+  +   R  L +P   +    IR+YP+IF E       G  + P   LT + ++L  
Subjt:  VDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIP--TRPIHLIRKYPSIFEEFL---PGGIGIQPHVRLTSQVLELDA

Query:  EE-QLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAK
        EE  +S   E   +    +L KLLM++    + L  ID L+WDLGLP DY  S++   PD F +V        S D   L+L+ W+  LA S ++     
Subjt:  EE-QLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMAAK

Query:  AETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLH
            V     ++FP+KF+ GF + +K  +W+ EWQ+LPY SPY +ASHL P +D S+K  V + HELLH+ I KK E++ +  + + F L  +F +    
Subjt:  AETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLH

Query:  HPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN
        HPGIFY+S K  T TV+L+E Y R  +IE  PL+ +R K+ ++MN
Subjt:  HPGIFYLSSKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGATGCTGTTGCGTGGAATTCCATGATTATGGGTGTGGCTAAATGTGGGGAAATTGGGGAGTCGAGGAAGCTGTTCGATAAAATGCCCGAAAGAAACCCAAT
CTCATGGAATTCCATGATTGGTGGGTATGTTAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAAGAGAAAATCAAGCCTAGTGAGTTTACAA
TGGTGAGCTTGTTAAACGCCTCAGCTCACATTGGAGCACTCAGGCAAGGGGAATGGATTCATGAGTACATAGAGAAGAACAATCTAGAGTTGAATCCCATTGTAGTTACA
GCAATCATAGACATGTACTGCAAATGTGGTAGCATAGTTAATGCCCTTCAAGTGTTTGAGAAAATGCCCAGCAGAGGATTATCTAGTTGGAACTCCATGATCTTCGGCCT
GGCTGTGAATGGCTGCGAAAATGAAGCAATTTTGTTATTCAGAATGCTGGAATCTTCGAGTCTTGAACCAGATTCTGAAAGGGTTTCAATGAGGATGAAGAATGTGGAGA
AAGAACCAGGGGGAAGCCTGATTGAAGTTGATGGTGAAGTTCATGAGTTTATAGCTGGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATTTACATTGTATTGGACCAA
TTGGGAAGGTGTACAATGTTTTTGTTATCGCGCAATCAATCCCAACAGCAACACCACCTTTTCCATTTATACATTCGAACGTATGTAGACGGCACCATAAAATGGGTTCG
AGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTTCTGCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTCCCAGTTTCCATCA
TAACGCAGAAAAGGGAAGTTCTAAGAATTCCAACGCGCCCCATTCATTTGATCAGAAAATATCCCTCTATTTTCGAAGAATTTCTCCCTGGAGGTATTGGCATTCAACCT
CATGTTCGGCTAACCTCTCAAGTCCTTGAGCTTGATGCCGAAGAACAGTTAAGCTATCAAGGCGAAAATTGTAGACAACGAGCTGCAGATCAACTTGTGAAGCTCTTAAT
GATTTCAAGAGTCCACAAAATACCTTTAAGTATCATTGATCAGTTGAAATGGGACCTGGGTCTTCCCAAGGATTACGTCCAAAGTATAGTTCCTGATTTTCCAGATTACT
TCAAGGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGAGATACGCGAGCGTTGGAATTGGTATGTTGGAACAATGAATTGGCCACCTCAGTTTTGGAGAAGATGGCT
GCGAAGGCAGAAACCAGCGTTTCGAAGGGAATGCCTATTAGTTTTCCTATGAAATTCTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTGGGTGGATGAATGGCA
AAAGCTACCTTACATTTCCCCTTATGAAAATGCATCACATCTCTCTCCGAGCAGCGATGAATCGGACAAGTGGGCGGTTGCGATCTTACATGAGCTTCTTCATATGCTCA
TTGCAAAGAAGATAGAGAAGGAAACTATACTGTTCATAGGCGAATATTTTGGCCTTCGGTCGAGGTTCAAGAGAGCATTGCTTCACCATCCAGGGATATTCTACCTATCG
AGTAAGAATGGAACATACACGGTTGTCTTAAAAGAGGGGTATAAAAGGGGTTCCGTAATTGAGAACAGCCCTTTGATAAACATTAGAAATAAGTACCTTCACCTTATGAA
TACAGTTAAGGAAGACAGTAAAACAACAACTGAACAAGGCGGTACTCGTCAACAGAAGAAAGAGGAGAAAGAACAGTCAGATGATGCTACTCGAAAAGAGAACGAAGCTG
AACTCCTCGACTCTTCGGACGAAGAAGCTGAAGACGATAGTAGTAATCTCAATGCCCGTGCTGATCGGAAAGAGGCTGCTGGTGGACGTAGGAGACATGTTGCTTTCCAA
GAAAATGTTGGTAGAAACAGAGTGAGATCATCGAAGAGAATGAACTCGACTTCGGGAAGGCCTTCAAGGGATGTTAAAAGAGAGAGGTTAAATAACAGTAAGGGATACCA
GGTGAGGACGAAGGTT
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGATGCTGTTGCGTGGAATTCCATGATTATGGGTGTGGCTAAATGTGGGGAAATTGGGGAGTCGAGGAAGCTGTTCGATAAAATGCCCGAAAGAAACCCAAT
CTCATGGAATTCCATGATTGGTGGGTATGTTAGAAATGGGATGTTCAAAGAAGCCCTGAAGCTGTTTGTCAAAATGCAAGAAGAGAAAATCAAGCCTAGTGAGTTTACAA
TGGTGAGCTTGTTAAACGCCTCAGCTCACATTGGAGCACTCAGGCAAGGGGAATGGATTCATGAGTACATAGAGAAGAACAATCTAGAGTTGAATCCCATTGTAGTTACA
GCAATCATAGACATGTACTGCAAATGTGGTAGCATAGTTAATGCCCTTCAAGTGTTTGAGAAAATGCCCAGCAGAGGATTATCTAGTTGGAACTCCATGATCTTCGGCCT
GGCTGTGAATGGCTGCGAAAATGAAGCAATTTTGTTATTCAGAATGCTGGAATCTTCGAGTCTTGAACCAGATTCTGAAAGGGTTTCAATGAGGATGAAGAATGTGGAGA
AAGAACCAGGGGGAAGCCTGATTGAAGTTGATGGTGAAGTTCATGAGTTTATAGCTGGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATTTACATTGTATTGGACCAA
TTGGGAAGGTGTACAATGTTTTTGTTATCGCGCAATCAATCCCAACAGCAACACCACCTTTTCCATTTATACATTCGAACGTATGTAGACGGCACCATAAAATGGGTTCG
AGATCGTGGTCTTGATCATGCTGTTGAGAGAGAGAAGAATCTTCTGCCAGTGATGAACATTAAAGATTTTATAAAATCAGAGCCGTCCAAGTCTGTCCCAGTTTCCATCA
TAACGCAGAAAAGGGAAGTTCTAAGAATTCCAACGCGCCCCATTCATTTGATCAGAAAATATCCCTCTATTTTCGAAGAATTTCTCCCTGGAGGTATTGGCATTCAACCT
CATGTTCGGCTAACCTCTCAAGTCCTTGAGCTTGATGCCGAAGAACAGTTAAGCTATCAAGGCGAAAATTGTAGACAACGAGCTGCAGATCAACTTGTGAAGCTCTTAAT
GATTTCAAGAGTCCACAAAATACCTTTAAGTATCATTGATCAGTTGAAATGGGACCTGGGTCTTCCCAAGGATTACGTCCAAAGTATAGTTCCTGATTTTCCAGATTACT
TCAAGGTTGTAGGACACCAAAATTTTGCATCTGGATCAGGAGATACGCGAGCGTTGGAATTGGTATGTTGGAACAATGAATTGGCCACCTCAGTTTTGGAGAAGATGGCT
GCGAAGGCAGAAACCAGCGTTTCGAAGGGAATGCCTATTAGTTTTCCTATGAAATTCTCGAATGGGTTTGAGATGGATAAGAAGTTCAAGAAGTGGGTGGATGAATGGCA
AAAGCTACCTTACATTTCCCCTTATGAAAATGCATCACATCTCTCTCCGAGCAGCGATGAATCGGACAAGTGGGCGGTTGCGATCTTACATGAGCTTCTTCATATGCTCA
TTGCAAAGAAGATAGAGAAGGAAACTATACTGTTCATAGGCGAATATTTTGGCCTTCGGTCGAGGTTCAAGAGAGCATTGCTTCACCATCCAGGGATATTCTACCTATCG
AGTAAGAATGGAACATACACGGTTGTCTTAAAAGAGGGGTATAAAAGGGGTTCCGTAATTGAGAACAGCCCTTTGATAAACATTAGAAATAAGTACCTTCACCTTATGAA
TACAGTTAAGGAAGACAGTAAAACAACAACTGAACAAGGCGGTACTCGTCAACAGAAGAAAGAGGAGAAAGAACAGTCAGATGATGCTACTCGAAAAGAGAACGAAGCTG
AACTCCTCGACTCTTCGGACGAAGAAGCTGAAGACGATAGTAGTAATCTCAATGCCCGTGCTGATCGGAAAGAGGCTGCTGGTGGACGTAGGAGACATGTTGCTTTCCAA
GAAAATGTTGGTAGAAACAGAGTGAGATCATCGAAGAGAATGAACTCGACTTCGGGAAGGCCTTCAAGGGATGTTAAAAGAGAGAGGTTAAATAACAGTAAGGGATACCA
GGTGAGGACGAAGGTT
Protein sequenceShow/hide protein sequence
MEFDAVAWNSMIMGVAKCGEIGESRKLFDKMPERNPISWNSMIGGYVRNGMFKEALKLFVKMQEEKIKPSEFTMVSLLNASAHIGALRQGEWIHEYIEKNNLELNPIVVT
AIIDMYCKCGSIVNALQVFEKMPSRGLSSWNSMIFGLAVNGCENEAILLFRMLESSSLEPDSERVSMRMKNVEKEPGGSLIEVDGEVHEFIAGGGRLHPKAQEIYIVLDQ
LGRCTMFLLSRNQSQQQHHLFHLYIRTYVDGTIKWVRDRGLDHAVEREKNLLPVMNIKDFIKSEPSKSVPVSIITQKREVLRIPTRPIHLIRKYPSIFEEFLPGGIGIQP
HVRLTSQVLELDAEEQLSYQGENCRQRAADQLVKLLMISRVHKIPLSIIDQLKWDLGLPKDYVQSIVPDFPDYFKVVGHQNFASGSGDTRALELVCWNNELATSVLEKMA
AKAETSVSKGMPISFPMKFSNGFEMDKKFKKWVDEWQKLPYISPYENASHLSPSSDESDKWAVAILHELLHMLIAKKIEKETILFIGEYFGLRSRFKRALLHHPGIFYLS
SKNGTYTVVLKEGYKRGSVIENSPLINIRNKYLHLMNTVKEDSKTTTEQGGTRQQKKEEKEQSDDATRKENEAELLDSSDEEAEDDSSNLNARADRKEAAGGRRRHVAFQ
ENVGRNRVRSSKRMNSTSGRPSRDVKRERLNNSKGYQVRTKV