; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006414 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006414
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOB domain-containing protein
Genome locationscaffold327:455340..457234
RNA-Seq ExpressionMS006414
SyntenyMS006414
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023005.1 LOB domain-containing protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-5084.87Show/hide
Query:  MGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEA
        M GSCKK APSPCAACKLLRRRC+QDCVF PYFPADQPHKFS VHKVFGASNV+KLLQE+ E+ RSDAVSSMVYEA ARI+DP+YGCVGTIS LQRQV+A
Subjt:  MGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEA

Query:  LQEQLAITQAQLLHLKMAQ
        LQ+QLA+TQAQLLH KMAQ
Subjt:  LQEQLAITQAQLLHLKMAQ

XP_022147981.1 LOB domain-containing protein 4-like [Momordica charantia]1.6e-6499.22Show/hide
Query:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL
        MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSS+VYEAKARIKDPVYGCVGTISSL
Subjt:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL

Query:  QRQVEALQEQLAITQAQLLHLKMAQCPT
        QRQVEALQEQLAITQAQLLHLKMAQCPT
Subjt:  QRQVEALQEQLAITQAQLLHLKMAQCPT

XP_022930643.1 LOB domain-containing protein 4-like [Cucurbita moschata]2.2e-5083.2Show/hide
Query:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL
        MA E+ M GSCKK APSPCAACKLLRRRC+QDCVF PYFPADQPHKFS VHKVFGASNV+KLLQE+ E+ RSDAVSSMVYEA ARI+DP+YGCVGTIS L
Subjt:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL

Query:  QRQVEALQEQLAITQAQLLHLKMAQ
        QRQV+ALQ+QLA+TQAQLLH KMAQ
Subjt:  QRQVEALQEQLAITQAQLLHLKMAQ

XP_023531527.1 LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo]4.9e-5082.4Show/hide
Query:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL
        MA E+ M GSCKK APSPCAACKLLRRRC+QDCVF PYFPADQPHKFS VHKVFGASNV+KLLQE+ E+ RSDAVSS+VYEA ARI+DP+YGCVGTIS L
Subjt:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL

Query:  QRQVEALQEQLAITQAQLLHLKMAQ
        QRQV+ALQ+QLA+TQAQLLH KMAQ
Subjt:  QRQVEALQEQLAITQAQLLHLKMAQ

XP_038888383.1 LOB domain-containing protein 4-like [Benincasa hispida]2.9e-4783.33Show/hide
Query:  MGGSCKK-SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVE
        M GSCKK S  +PCAACKLLRRRC+QDCVF PYFPADQPHKFS VHKVFGASNVSKLLQE+ E QRSDAVSSMVYEA ARI+DPVYGCVGTIS LQRQV+
Subjt:  MGGSCKK-SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVE

Query:  ALQEQLAITQAQLLHLKMAQ
        ALQ+QLA+TQAQL+ LKM Q
Subjt:  ALQEQLAITQAQLLHLKMAQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5P4 LOB domain-containing protein7.8e-4678.23Show/hide
Query:  MGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQV
        M GSCKK   A +PCAACKLLRRRC+ DCVF PYFPAD PHKFS VHKVFGASNVSKLLQE+ E+QRSDAVSSMVYEA ARI+DPVYGCVG IS LQ+QV
Subjt:  MGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQV

Query:  EALQEQLAITQAQLLHLKMAQCPT
        +ALQ+QLAITQAQL+ +KM Q  T
Subjt:  EALQEQLAITQAQLLHLKMAQCPT

A0A1S3BGP4 LOB domain-containing protein 4-like2.4e-4777.52Show/hide
Query:  ATEVNMGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISS
        ++E+ M GSCKK   A +PCAACKLLRRRC+ DCVF PYFPAD PHKFS VHKVFGASNVSKLLQE+ E+QRSDAVSSMVYEA ARI+DPVYGCVGTIS 
Subjt:  ATEVNMGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISS

Query:  LQRQVEALQEQLAITQAQLLHLKMAQCPT
        LQ+QV+ALQ+QLAITQAQL+ LKM Q  T
Subjt:  LQRQVEALQEQLAITQAQLLHLKMAQCPT

A0A5A7U720 LOB domain-containing protein 4-like2.4e-4777.52Show/hide
Query:  ATEVNMGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISS
        ++E+ M GSCKK   A +PCAACKLLRRRC+ DCVF PYFPAD PHKFS VHKVFGASNVSKLLQE+ E+QRSDAVSSMVYEA ARI+DPVYGCVGTIS 
Subjt:  ATEVNMGGSCKK--SAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISS

Query:  LQRQVEALQEQLAITQAQLLHLKMAQCPT
        LQ+QV+ALQ+QLAITQAQL+ LKM Q  T
Subjt:  LQRQVEALQEQLAITQAQLLHLKMAQCPT

A0A6J1D3Z9 LOB domain-containing protein 4-like7.5e-6599.22Show/hide
Query:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL
        MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSS+VYEAKARIKDPVYGCVGTISSL
Subjt:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL

Query:  QRQVEALQEQLAITQAQLLHLKMAQCPT
        QRQVEALQEQLAITQAQLLHLKMAQCPT
Subjt:  QRQVEALQEQLAITQAQLLHLKMAQCPT

A0A6J1EVU9 LOB domain-containing protein 4-like1.1e-5083.2Show/hide
Query:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL
        MA E+ M GSCKK APSPCAACKLLRRRC+QDCVF PYFPADQPHKFS VHKVFGASNV+KLLQE+ E+ RSDAVSSMVYEA ARI+DP+YGCVGTIS L
Subjt:  MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSL

Query:  QRQVEALQEQLAITQAQLLHLKMAQ
        QRQV+ALQ+QLA+TQAQLLH KMAQ
Subjt:  QRQVEALQEQLAITQAQLLHLKMAQ

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 151.0e-3461.47Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        +PCAACKLLRRRC+Q+C F PYF   +PHKF+ VHKVFGASNVSK+L EV E QR+DA +S+VYEA  R++DPVYGC+G IS+LQ+QV+ALQ +L   ++
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLLHLKMAQ
        ++L  K  +
Subjt:  QLLHLKMAQ

Q8L8Q3 LOB domain-containing protein 253.0e-3466.99Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        SPCAACK LRR+C+ DCVF PYFP ++P KF+ VH++FGASNVSK+L EVA  QR DAV+S+ YEA+AR+KDPVYGCVG IS LQRQV  LQ +L  T A
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLL
         L+
Subjt:  QLL

Q8LBW3 LOB domain-containing protein 128.9e-3966.96Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        SPCA+CKLLRRRC++DC+F PYFP D PHKF+ VHKVFGASNVSK+LQE+   QR+DAV+S+V+EA AR++DPVYGCVG IS LQ QV  LQ QLA+ QA
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLLHLKMAQCPT
        ++L ++M   PT
Subjt:  QLLHLKMAQCPT

Q9SA51 LOB domain-containing protein 31.5e-3871.03Show/hide
Query:  SPCAACKLLRRRCSQD-CVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQ
        SPCA CKLLRR+C +D CVF PYFPA +P+KF+ VHK+FGASNV+K+LQE++E  RSDAV SMVYEA ARI+DPVYGCVGTISSL RQ+E LQ QLA  Q
Subjt:  SPCAACKLLRRRCSQD-CVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQ

Query:  AQLLHLK
        A+L+H++
Subjt:  AQLLHLK

Q9SHE9 LOB domain-containing protein 48.6e-4269.83Show/hide
Query:  SCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQE
        S K+ A SPCAACKLLRRRC+QDCVF PYFPAD+P KF+ VH+VFGASNV+K+LQE+   QR DAVSSMVYEA AR++DPVYGCVG ISSLQ+Q++ LQ 
Subjt:  SCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQE

Query:  QLAITQAQLLHLKMAQ
        QLA+ QA+++HL++ Q
Subjt:  QLAITQAQLLHLKMAQ

Arabidopsis top hitse value%identityAlignment
AT1G16530.1 ASYMMETRIC LEAVES 2-like 91.1e-3971.03Show/hide
Query:  SPCAACKLLRRRCSQD-CVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQ
        SPCA CKLLRR+C +D CVF PYFPA +P+KF+ VHK+FGASNV+K+LQE++E  RSDAV SMVYEA ARI+DPVYGCVGTISSL RQ+E LQ QLA  Q
Subjt:  SPCAACKLLRRRCSQD-CVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQ

Query:  AQLLHLK
        A+L+H++
Subjt:  AQLLHLK

AT1G31320.1 LOB domain-containing protein 46.1e-4369.83Show/hide
Query:  SCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQE
        S K+ A SPCAACKLLRRRC+QDCVF PYFPAD+P KF+ VH+VFGASNV+K+LQE+   QR DAVSSMVYEA AR++DPVYGCVG ISSLQ+Q++ LQ 
Subjt:  SCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQE

Query:  QLAITQAQLLHLKMAQ
        QLA+ QA+++HL++ Q
Subjt:  QLAITQAQLLHLKMAQ

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein6.3e-4066.96Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        SPCA+CKLLRRRC++DC+F PYFP D PHKF+ VHKVFGASNVSK+LQE+   QR+DAV+S+V+EA AR++DPVYGCVG IS LQ QV  LQ QLA+ QA
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLLHLKMAQCPT
        ++L ++M   PT
Subjt:  QLLHLKMAQCPT

AT2G40470.1 LOB domain-containing protein 157.3e-3661.47Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        +PCAACKLLRRRC+Q+C F PYF   +PHKF+ VHKVFGASNVSK+L EV E QR+DA +S+VYEA  R++DPVYGC+G IS+LQ+QV+ALQ +L   ++
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLLHLKMAQ
        ++L  K  +
Subjt:  QLLHLKMAQ

AT3G27650.1 LOB domain-containing protein 252.1e-3566.99Show/hide
Query:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA
        SPCAACK LRR+C+ DCVF PYFP ++P KF+ VH++FGASNVSK+L EVA  QR DAV+S+ YEA+AR+KDPVYGCVG IS LQRQV  LQ +L  T A
Subjt:  SPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQLAITQA

Query:  QLL
         L+
Subjt:  QLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGAGGTGAATATGGGCGGGAGCTGCAAAAAGAGTGCCCCATCCCCATGCGCCGCGTGCAAGCTTCTGCGGCGGCGGTGCTCTCAGGACTGCGTATTTGGCCC
TTATTTCCCAGCCGACCAGCCCCACAAATTCTCCTGCGTCCATAAAGTCTTTGGAGCTAGTAATGTCAGCAAGTTGTTGCAGGAAGTGGCAGAGGAGCAGCGGAGCGACG
CGGTGAGTTCGATGGTGTACGAAGCGAAGGCGAGAATAAAAGACCCGGTTTACGGGTGCGTGGGAACAATATCGAGCCTACAGCGGCAAGTGGAGGCACTCCAAGAGCAA
CTGGCCATCACCCAGGCCCAGCTGCTCCACTTGAAAATGGCCCAATGCCCCACT
mRNA sequenceShow/hide mRNA sequence
ATGGCGACGGAGGTGAATATGGGCGGGAGCTGCAAAAAGAGTGCCCCATCCCCATGCGCCGCGTGCAAGCTTCTGCGGCGGCGGTGCTCTCAGGACTGCGTATTTGGCCC
TTATTTCCCAGCCGACCAGCCCCACAAATTCTCCTGCGTCCATAAAGTCTTTGGAGCTAGTAATGTCAGCAAGTTGTTGCAGGAAGTGGCAGAGGAGCAGCGGAGCGACG
CGGTGAGTTCGATGGTGTACGAAGCGAAGGCGAGAATAAAAGACCCGGTTTACGGGTGCGTGGGAACAATATCGAGCCTACAGCGGCAAGTGGAGGCACTCCAAGAGCAA
CTGGCCATCACCCAGGCCCAGCTGCTCCACTTGAAAATGGCCCAATGCCCCACT
Protein sequenceShow/hide protein sequence
MATEVNMGGSCKKSAPSPCAACKLLRRRCSQDCVFGPYFPADQPHKFSCVHKVFGASNVSKLLQEVAEEQRSDAVSSMVYEAKARIKDPVYGCVGTISSLQRQVEALQEQ
LAITQAQLLHLKMAQCPT