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MS006421 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006421
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold327:514591..514968
RNA-Seq ExpressionMS006421
SyntenyMS006421
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051102.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa]1.2e-5389.68Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLL
        MKQLIRRLSRVADSSQYCLLRSDS S    ATKLRRSRILRS+TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVLL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLL

Query:  FERVLEALRVGDYASPHLQDLLSSLS
        FERVLEALR+GDY S HLQDLLS+LS
Subjt:  FERVLEALRVGDYASPHLQDLLSSLS

XP_008466916.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]1.6e-5388.98Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDS S     ATKLRRSRILRS+TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRVGDYASPHLQDLLSSLS
        LFERVLEALR+GDY S HLQDLLS+LS
Subjt:  LFERVLEALRVGDYASPHLQDLLSSLS

XP_022147859.1 auxin-responsive protein SAUR71 [Momordica charantia]3.2e-6299.21Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
        MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV

Query:  LEALRVGDYASPHLQDLLSSLSPDLH
        LEALR+GDYASPHLQDLLSSLSPDLH
Subjt:  LEALRVGDYASPHLQDLLSSLSPDLH

XP_022969445.1 auxin-responsive protein SAUR71 [Cucurbita maxima]1.2e-5391.06Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS-ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFER
        MKQLIRRLSRVADSSQYCLLRSDS + ATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVLLFER
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS-ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFER

Query:  VLEALRVGDYASPHLQDLLSSLS
        VLEALR+GDY S HLQDLLS+LS
Subjt:  VLEALRVGDYASPHLQDLLSSLS

XP_038888278.1 auxin-responsive protein SAUR71 [Benincasa hispida]1.6e-5389.76Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDS S     ATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHP+FVELL+KSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRVGDYASPHLQDLLSSLS
        LFERVLEALR+GDY S HLQDLLS+LS
Subjt:  LFERVLEALRVGDYASPHLQDLLSSLS

TrEMBL top hitse value%identityAlignment
A0A1S3CSH0 auxin-responsive protein SAUR71-like7.7e-5488.98Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL
        MKQLIRRLSRVADSSQYCLLRSDS S     ATKLRRSRILRS+TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS-----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVL

Query:  LFERVLEALRVGDYASPHLQDLLSSLS
        LFERVLEALR+GDY S HLQDLLS+LS
Subjt:  LFERVLEALRVGDYASPHLQDLLSSLS

A0A5A7U5G4 Auxin-responsive protein SAUR71-like5.9e-5489.68Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLL
        MKQLIRRLSRVADSSQYCLLRSDS S    ATKLRRSRILRS+TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVLL
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS----ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLL

Query:  FERVLEALRVGDYASPHLQDLLSSLS
        FERVLEALR+GDY S HLQDLLS+LS
Subjt:  FERVLEALRVGDYASPHLQDLLSSLS

A0A6J1D294 auxin-responsive protein SAUR711.5e-6299.21Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
        MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV

Query:  LEALRVGDYASPHLQDLLSSLSPDLH
        LEALR+GDYASPHLQDLLSSLSPDLH
Subjt:  LEALRVGDYASPHLQDLLSSLSPDLH

A0A6J1GJB9 auxin-responsive protein SAUR71-like1.0e-5389.6Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQ---SATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLF
        MKQLIRRLSRVADSSQYCLLRSDS    +ATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVLLF
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQ---SATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLF

Query:  ERVLEALRVGDYASPHLQDLLSSLS
        ERVLEALR+GDY S HLQDLLS+LS
Subjt:  ERVLEALRVGDYASPHLQDLLSSLS

A0A6J1HZY4 auxin-responsive protein SAUR715.9e-5491.06Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQS-ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFER
        MKQLIRRLSRVADSSQYCLLRSDS + ATKLRRSRILRS TVPQGHVPVYVGEEMERFVVSAQLLNHP+F+ELL+KSAQEYGYEQKGVLHIPCHVLLFER
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQS-ATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFER

Query:  VLEALRVGDYASPHLQDLLSSLS
        VLEALR+GDY S HLQDLLS+LS
Subjt:  VLEALRVGDYASPHLQDLLSSLS

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR403.7e-2955.81Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRS-------DSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCH
        MK LIRRLSR+ADSS     RS        + S++     R   +++VP GHVPV VGE+ ERFVVSA+LLNHP+FV LLN+SAQEYGY QKGVLHIPC+
Subjt:  MKQLIRRLSRVADSSQYCLLRS-------DSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCH

Query:  VLLFERVLEALRVGDYASPHLQDLLSSLS
        V +FE+V+E+LR G   +    +L++SLS
Subjt:  VLLFERVLEALRVGDYASPHLQDLLSSLS

Q9LTV3 Auxin-responsive protein SAUR725.2e-3967.72Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQ-----SATKLRRSRILRS----ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIP
        MKQLIRRLSRVADS+QY LLRSDSQ     S + LR S   RS    ++VP+GHVPVYVG+EMERFVVSA+LLNHP+F+ LLN+SAQEYGYEQKGVL IP
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQ-----SATKLRRSRILRS----ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRVGDYASPHLQDLL
        CHVL+FER++E+LR+G      +QDL+
Subjt:  CHVLLFERVLEALRVGDYASPHLQDLL

Q9SA49 Auxin-responsive protein SAUR412.9e-3460Show/hide
Query:  MKQLIRRLSRVAD-SSQYCLLRSDSQSATKLRRSRI------------LRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGV
        MK LIRRLSRVAD SS++ + RS S    +    R+             R  TVP GHVPVYVGEEMERFVVSA+L+NHPIFV LLN+SAQEYGY QKGV
Subjt:  MKQLIRRLSRVAD-SSQYCLLRSDSQSATKLRRSRI------------LRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGV

Query:  LHIPCHVLLFERVLEALRVGDY-ASPHLQDLLSSL
        LHIPCHV++FERV+E LR+G +  S  L++L++SL
Subjt:  LHIPCHVLLFERVLEALRVGDY-ASPHLQDLLSSL

Q9SGU2 Auxin-responsive protein SAUR714.1e-3671.03Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
        MKQLIRRLSRVADS+QY LLRS+SQ     R  +    + VP+GHVPVYVG EMERFVV+A+LLNHP+FV LL +SAQEYGYEQ+GVL IPCHVL+FER+
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV

Query:  LEALRVG
        LE+LR+G
Subjt:  LEALRVG

Q9ZUZ3 Auxin-responsive protein SAUR324.5e-1140.96Show/hide
Query:  KLRRSRILRSATVPQGHVPVYV---GEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERVLEALRVGD
        +L R + ++   VP+G + + V   GEE +RF+V     NHP+F++LL ++  EYG++QKG + IPCHV  F R ++AL  G+
Subjt:  KLRRSRILRSATVPQGHVPVYV---GEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERVLEALRVGD

Arabidopsis top hitse value%identityAlignment
AT1G16510.1 SAUR-like auxin-responsive protein family2.1e-3560Show/hide
Query:  MKQLIRRLSRVAD-SSQYCLLRSDSQSATKLRRSRI------------LRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGV
        MK LIRRLSRVAD SS++ + RS S    +    R+             R  TVP GHVPVYVGEEMERFVVSA+L+NHPIFV LLN+SAQEYGY QKGV
Subjt:  MKQLIRRLSRVAD-SSQYCLLRSDSQSATKLRRSRI------------LRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGV

Query:  LHIPCHVLLFERVLEALRVGDY-ASPHLQDLLSSL
        LHIPCHV++FERV+E LR+G +  S  L++L++SL
Subjt:  LHIPCHVLLFERVLEALRVGDY-ASPHLQDLLSSL

AT1G56150.1 SAUR-like auxin-responsive protein family2.9e-3771.03Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV
        MKQLIRRLSRVADS+QY LLRS+SQ     R  +    + VP+GHVPVYVG EMERFVV+A+LLNHP+FV LL +SAQEYGYEQ+GVL IPCHVL+FER+
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERV

Query:  LEALRVG
        LE+LR+G
Subjt:  LEALRVG

AT1G79130.1 SAUR-like auxin-responsive protein family2.6e-3055.81Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRS-------DSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCH
        MK LIRRLSR+ADSS     RS        + S++     R   +++VP GHVPV VGE+ ERFVVSA+LLNHP+FV LLN+SAQEYGY QKGVLHIPC+
Subjt:  MKQLIRRLSRVADSSQYCLLRS-------DSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCH

Query:  VLLFERVLEALRVGDYASPHLQDLLSSLS
        V +FE+V+E+LR G   +    +L++SLS
Subjt:  VLLFERVLEALRVGDYASPHLQDLLSSLS

AT3G12830.1 SAUR-like auxin-responsive protein family3.7e-4067.72Show/hide
Query:  MKQLIRRLSRVADSSQYCLLRSDSQ-----SATKLRRSRILRS----ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIP
        MKQLIRRLSRVADS+QY LLRSDSQ     S + LR S   RS    ++VP+GHVPVYVG+EMERFVVSA+LLNHP+F+ LLN+SAQEYGYEQKGVL IP
Subjt:  MKQLIRRLSRVADSSQYCLLRSDSQ-----SATKLRRSRILRS----ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIP

Query:  CHVLLFERVLEALRVGDYASPHLQDLL
        CHVL+FER++E+LR+G      +QDL+
Subjt:  CHVLLFERVLEALRVGDYASPHLQDLL

AT5G10990.1 SAUR-like auxin-responsive protein family1.9e-1248.68Show/hide
Query:  QSATKLRRSRILRS--ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFE
        Q   K R S + RS  + VP GHV VYVG    RFVV A  LNHPI + LL K+ +E+G+  +G L IPC   +FE
Subjt:  QSATKLRRSRILRS--ATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGTTGATTCGCCGCCTTTCCCGAGTCGCTGATTCCTCTCAATATTGTCTTCTCCGATCCGACTCTCAATCCGCCACCAAACTCCGCCGTTCGCGAATTCTCCG
TTCCGCCACCGTGCCTCAGGGCCACGTCCCCGTTTACGTCGGAGAAGAGATGGAGAGGTTCGTGGTCAGCGCTCAGCTCCTGAACCACCCGATCTTTGTGGAGCTCCTCA
ACAAATCCGCCCAAGAGTACGGCTACGAACAAAAAGGCGTTCTACACATTCCCTGTCACGTTCTCCTCTTCGAGCGGGTCCTCGAGGCTCTCAGAGTCGGTGATTACGCC
TCGCCTCATCTCCAAGATCTTCTTTCCTCCCTCTCTCCAGACCTCCAC
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGTTGATTCGCCGCCTTTCCCGAGTCGCTGATTCCTCTCAATATTGTCTTCTCCGATCCGACTCTCAATCCGCCACCAAACTCCGCCGTTCGCGAATTCTCCG
TTCCGCCACCGTGCCTCAGGGCCACGTCCCCGTTTACGTCGGAGAAGAGATGGAGAGGTTCGTGGTCAGCGCTCAGCTCCTGAACCACCCGATCTTTGTGGAGCTCCTCA
ACAAATCCGCCCAAGAGTACGGCTACGAACAAAAAGGCGTTCTACACATTCCCTGTCACGTTCTCCTCTTCGAGCGGGTCCTCGAGGCTCTCAGAGTCGGTGATTACGCC
TCGCCTCATCTCCAAGATCTTCTTTCCTCCCTCTCTCCAGACCTCCAC
Protein sequenceShow/hide protein sequence
MKQLIRRLSRVADSSQYCLLRSDSQSATKLRRSRILRSATVPQGHVPVYVGEEMERFVVSAQLLNHPIFVELLNKSAQEYGYEQKGVLHIPCHVLLFERVLEALRVGDYA
SPHLQDLLSSLSPDLH