CuGenDBv2

Gene ID	MS006426
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Style cell-cycle inhibitor 1
Genome location	scaffold327:561145..561375
RNA-Seq Expression	MS006426
Synteny	MS006426
Gene Ontology terms	GO:0010928 - regulation of auxin mediated signaling pathway (biological process) GO:0048479 - style development (biological process) GO:0048480 - stigma development (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	IPR044688 - Style cell-cycle inhibitor 1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6572474.1 Style cell-cycle inhibitor 1-B, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-32

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWND++LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

XP_022147997.1 protein PXR1 [Momordica charantia]

5.4e-36

100

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

XP_022952367.1 protein PXR1 isoform X1 [Cucurbita moschata]

1.2e-32

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWND++LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

XP_022969411.1 luc7-like protein 3 isoform X1 [Cucurbita maxima]

1.2e-32

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWND++LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

XP_023553665.1 luc7-like protein 3 [Cucurbita pepo subsp. pepo]

4.2e-33

93.51

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQ+LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K434 Uncharacterized protein

7.8e-33

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK +ELSKEDYFSKNNEFATWLKD KNVYFSDLSSESAR+LFSDFVELWND+KLESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

A0A1S3BGM9 protein PXR1 isoform X2

2.3e-32

90.91

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        R K +ELSKEDYFSKNNEFATWLKD KNVYFSDLSSESAR+LFSDFVELWND+KLESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

A0A6J1D3V9 protein PXR1

2.6e-36

100

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

A0A6J1GK84 protein PXR1 isoform X1

6.0e-33

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWND++LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

A0A6J1HXQ3 luc7-like protein 3 isoform X1

6.0e-33

92.21

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Query:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG
        RAK EELS+EDYF KNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWND++LESRYYEGI+SGPRTSHNWKIKG
Subjt:  RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

SwissProt top hits

e value

%identity

Alignment

A0A1S3XQD6 Style cell-cycle inhibitor 1-B

1.1e-26

74.32

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Query:  KYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK
        K+EELSK+DYFSKNNEFA+WLKD+KN++FSDLSSE+AR LFSDFV  WN  KL+S+YYEGI +GPR+SH W IK
Subjt:  KYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK

A0A1S4AX27 Style cell-cycle inhibitor 1-A

4.7e-27

75.68

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Query:  KYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK
        K+EELSK+DYFSKNNEFATWLKD+KN++FSDLSSE+AR LFSDFV  WN  KL+S+YYEGI +GPR+SH W IK
Subjt:  KYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK

Q8GWY0 Style cell-cycle inhibitor 1

6.4e-24

71.83

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Query:  ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK
        ELS EDYFSKNNEFATWLK+EK  YF+DL++E+AR LFS FV+ WN  KLESRYYEGI++ PRT+H+W IK
Subjt:  ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK

Arabidopsis top hits

e value

%identity

Alignment

AT1G79200.1 unknown protein

4.5e-25

71.83

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Query:  ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK
        ELS EDYFSKNNEFATWLK+EK  YF+DL++E+AR LFS FV+ WN  KLESRYYEGI++ PRT+H+W IK
Subjt:  ELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIK

Sequences

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CDS sequence

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AGAGCCAAATATGAAGAACTGTCGAAGGAGGACTATTTCTCAAAGAATAATGAGTTTGCTACCTGGTTGAAAGATGAGAAAAATGTGTATTTCTCTGATCTCTCGTCGGA
GTCTGCTCGCAAGCTTTTCTCTGATTTTGTTGAACTGTGGAATGACCAAAAGCTTGAATCTCGATATTATGAGGGTATTACAAGTGGGCCTCGGACATCCCATAACTGGA
AAATCAAGGGG

mRNA sequence

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Protein sequence

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RAKYEELSKEDYFSKNNEFATWLKDEKNVYFSDLSSESARKLFSDFVELWNDQKLESRYYEGITSGPRTSHNWKIKG

MS006426 (gene) of Bitter gourd (TR) v1 genome