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MS006442 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006442
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionStructural maintenance of chromosomes protein
Genome locationscaffold327:654749..654862
RNA-Seq ExpressionMS006442
SyntenyMS006442
Gene Ontology termsGO:0000819 - sister chromatid segregation (biological process)
GO:0051301 - cell division (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005694 - chromosome (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570330.1 Structural maintenance of chromosomes protein 3, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0792.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
KAG7010223.1 Structural maintenance of chromosomes protein 3 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-0792.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
XP_022943912.1 structural maintenance of chromosomes protein 3 [Cucurbita moschata]1.2e-0792.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
XP_022985698.1 structural maintenance of chromosomes protein 3 [Cucurbita maxima]1.2e-0792.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
XP_023512427.1 structural maintenance of chromosomes protein 3 [Cucurbita pepo subsp. pepo]1.2e-0792.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
TrEMBL top hitse value%identityAlignment
A0A5B7AZT0 Putative structural maintenance of chromosomes protein 3 (Fragment)3.1e-0684.21Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRN+LLAK+EEYSKK  ELG LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
A0A5B7B119 Structural maintenance of chromosomes protein3.1e-0684.21Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRN+LLAK+EEYSKK  ELG LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
A0A6J1DIL6 Structural maintenance of chromosomes protein1.6e-0791.89Show/hide
Query:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        KELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
A0A6J1FUC2 Structural maintenance of chromosomes protein5.6e-0892.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
A0A6J1JE08 Structural maintenance of chromosomes protein5.6e-0892.11Show/hide
Query:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        AKELEQ LSKRNVLLAKEEEYSKK GELG+LSSDAFET
Subjt:  AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
SwissProt top hitse value%identityAlignment
Q56YN8 Structural maintenance of chromosomes protein 34.7e-0462.16Show/hide
Query:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        K+LE+  S RN LLAK++EY+KK   LG LSSDAF+T
Subjt:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
Arabidopsis top hitse value%identityAlignment
AT2G27170.1 Structural maintenance of chromosomes (SMC) family protein3.4e-0562.16Show/hide
Query:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        K+LE+  S RN LLAK++EY+KK   LG LSSDAF+T
Subjt:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
AT2G27170.2 Structural maintenance of chromosomes (SMC) family protein3.4e-0562.16Show/hide
Query:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET
        K+LE+  S RN LLAK++EY+KK   LG LSSDAF+T
Subjt:  KELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTAAAGAATTGGAGCAACCGCTAAGCAAAAGGAATGTTCTTCTTGCCAAAGAAGAAGAGTATTCAAAGAAAACTGGAGAACTGGGTGTACTGTCATCTGATGCTTTTGA
AACG
mRNA sequenceShow/hide mRNA sequence
GCTAAAGAATTGGAGCAACCGCTAAGCAAAAGGAATGTTCTTCTTGCCAAAGAAGAAGAGTATTCAAAGAAAACTGGAGAACTGGGTGTACTGTCATCTGATGCTTTTGA
AACG
Protein sequenceShow/hide protein sequence
AKELEQPLSKRNVLLAKEEEYSKKTGELGVLSSDAFET