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MS006443 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006443
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCysteine-rich PDZ-binding protein
Genome locationscaffold327:654912..655174
RNA-Seq ExpressionMS006443
SyntenyMS006443
Gene Ontology termsGO:0031122 - cytoplasmic microtubule organization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsIPR019367 - PDZ-binding protein, CRIPT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KNA15065.1 hypothetical protein SOVF_101560, partial [Spinacia oleracea]1.0e-1477.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
PON31992.1 PDZ-binding protein, CRIPT [Parasponia andersonii]1.0e-1477.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
XP_004134750.1 cysteine-rich PDZ-binding protein [Cucumis sativus]1.0e-1477.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
XP_004496774.1 cysteine-rich PDZ-binding protein [Cicer arietinum]1.0e-1477.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
XP_021866364.1 cysteine-rich PDZ-binding protein [Spinacia oleracea]1.0e-1477.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
TrEMBL top hitse value%identityAlignment
A0A0A0KHE3 Cysteine-rich PDZ-binding protein5.0e-1577.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
A0A0K9R6D2 Cysteine-rich PDZ-binding protein (Fragment)5.0e-1577.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
A0A1S2XZ43 Cysteine-rich PDZ-binding protein5.0e-1577.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
A0A2P5A629 Cysteine-rich PDZ-binding protein5.0e-1577.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
A0A5D3CPV5 Cysteine-rich PDZ-binding protein5.0e-1577.36Show/hide
Query:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RWTPYGNTK IICK      G +  HTCAYSKGVCAMCGK+VLDTKFYKQSNV
Subjt:  RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
SwissProt top hitse value%identityAlignment
O70333 Cysteine-rich PDZ-binding protein5.6e-1155.36Show/hide
Query:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        R+ PYG  KF    ICK +   PG      CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
Q3ZC66 Cysteine-rich PDZ-binding protein5.6e-1155.36Show/hide
Query:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        R+ PYG  KF    ICK +   PG      CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
Q5ZKB6 Cysteine-rich PDZ-binding protein9.5e-1153.57Show/hide
Query:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        R+ PYG  KF    ICK +   PG      CAY KG+C+MCGK+VLDTK YKQ++V
Subjt:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
Q792Q4 Cysteine-rich PDZ-binding protein5.6e-1155.36Show/hide
Query:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        R+ PYG  KF    ICK +   PG      CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
Q9P021 Cysteine-rich PDZ-binding protein5.6e-1155.36Show/hide
Query:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        R+ PYG  KF    ICK +   PG      CAY KG+CAMCGK+VLDTK YKQ++V
Subjt:  RWTPYGNTKFI---ICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
Arabidopsis top hitse value%identityAlignment
AT1G61780.1 postsynaptic protein-related2.5e-1465.45Show/hide
Query:  RWTPYG--NTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV
        RW+PY    TK +ICK      G +  HTCAYSKGVCAMCGK+VLDTK YKQSNV
Subjt:  RWTPYG--NTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATGGACTCCTTATGGAAATACTAAGTTCATAATTTGTAAGCATGCAGCGAGTACACCAGGATGCCAAGTATTTCACACATGTGCTTACAGCAAAGGGGTTTGCGCCAT
GTGCGGGAAGCGAGTACTTGACACCAAGTTTTATAAACAAAGCAATGTG
mRNA sequenceShow/hide mRNA sequence
AGATGGACTCCTTATGGAAATACTAAGTTCATAATTTGTAAGCATGCAGCGAGTACACCAGGATGCCAAGTATTTCACACATGTGCTTACAGCAAAGGGGTTTGCGCCAT
GTGCGGGAAGCGAGTACTTGACACCAAGTTTTATAAACAAAGCAATGTG
Protein sequenceShow/hide protein sequence
RWTPYGNTKFIICKHAASTPGCQVFHTCAYSKGVCAMCGKRVLDTKFYKQSNV