; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006456 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006456
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationscaffold761:26362..26448
RNA-Seq ExpressionMS006456
SyntenyMS006456
Gene Ontology termsNA
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004508996.1 vacuolar protein sorting-associated protein 55 homolog isoform X4 [Cicer arietinum]5.4e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]5.4e-0593.1Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGASTVGSIAIP ILKHA+II
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
XP_027192147.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cicer arietinum]5.4e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
XP_027192149.1 vacuolar protein sorting-associated protein 55 homolog isoform X3 [Cicer arietinum]5.4e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
XP_027192150.1 vacuolar protein sorting-associated protein 55 homolog isoform X5 [Cicer arietinum]5.4e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
TrEMBL top hitse value%identityAlignment
A0A1S2YS07 vacuolar protein sorting-associated protein 55 homolog isoform X42.6e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
A0A1S2YS16 vacuolar protein sorting-associated protein 55 homolog isoform X12.6e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
A0A3Q7XV28 vacuolar protein sorting-associated protein 55 homolog isoform X22.6e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
A0A3Q7YGF5 vacuolar protein sorting-associated protein 55 homolog isoform X52.6e-0589.66Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGAS VGSIAIPAILKH+D+I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog2.6e-0593.1Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        WVNATKFLTGASTVGSIAIP ILKHA+II
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
SwissProt top hitse value%identityAlignment
Q9AST6 Vacuolar protein sorting-associated protein 55 homolog3.9e-0675.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein2.7e-0775.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein2.7e-0775.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein2.7e-0775.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein2.7e-0775.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII
AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein2.7e-0775.86Show/hide
Query:  WVNATKFLTGASTVGSIAIPAILKHADII
        W+NA KFLTGAS VGS+AIP+ILKHA +I
Subjt:  WVNATKFLTGASTVGSIAIPAILKHADII

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGTGAATGCGACTAAATTTTTAACTGGGGCTTCAACGGTTGGAAGCATTGCAATACCTGCAATTTTGAAGCATGCTGATATTATC
mRNA sequenceShow/hide mRNA sequence
TGGGTGAATGCGACTAAATTTTTAACTGGGGCTTCAACGGTTGGAAGCATTGCAATACCTGCAATTTTGAAGCATGCTGATATTATC
Protein sequenceShow/hide protein sequence
WVNATKFLTGASTVGSIAIPAILKHADII