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MS006481 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006481
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionocticosapeptide/Phox/Bem1p (PB1) domain-containing protein
Genome locationscaffold404:114044..114379
RNA-Seq ExpressionMS006481
SyntenyMS006481
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031407.1 formin-like protein 20 [Cucumis melo var. makuwa]3.0e-5696.4Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGGDTKIFAVDRSIKFASM+AKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

KAG7011570.1 hypothetical protein SDJN02_26476, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-5594.59Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGG+TKIFAVDRS+KFASMLAKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG+PARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

XP_008455095.2 PREDICTED: LOW QUALITY PROTEIN: formin-like protein 20 [Cucumis melo]1.2e-5595.5Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGGDTKIFAVDRSIKFASM+AKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
         FLFPANQSPS
Subjt:  LFLFPANQSPS

XP_023554167.1 uncharacterized protein LOC111811512 [Cucurbita pepo subsp. pepo]1.5e-5594.59Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGG+TKIFAVDRS+KFASMLAKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG+PARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

XP_038888344.1 uncharacterized protein LOC120078192 [Benincasa hispida]8.8e-5695.5Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGG+TKIFAVDRSIKFASM+AKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

TrEMBL top hitse value%identityAlignment
A0A0A0K2B0 PB1 domain-containing protein2.1e-5595.5Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGGDTKIFAVDRSIKFASM+AKLSS  D DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

A0A1S3C038 LOW QUALITY PROTEIN: formin-like protein 205.6e-5695.5Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGGDTKIFAVDRSIKFASM+AKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
         FLFPANQSPS
Subjt:  LFLFPANQSPS

A0A5A7SPJ4 Formin-like protein 201.5e-5696.4Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGGDTKIFAVDRSIKFASM+AKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

A0A6J1GL59 uncharacterized protein LOC1114549627.3e-5694.59Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGG+TKIFAVDRS+KFASMLAKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG+PARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

A0A6J1I4J8 uncharacterized protein LOC1114706037.3e-5694.59Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR
        NYKVKFMCSYGGKIHPRPHDN+LSYVGG+TKIFAVDRS+KFASMLAKLSS CD DVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG+PARMR
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMR

Query:  LFLFPANQSPS
        LFLFPANQSPS
Subjt:  LFLFPANQSPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01190.1 Octicosapeptide/Phox/Bem1p family protein2.4e-2755.66Show/hide
Query:  KVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSS--FCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG--RPAR
        K++FMCSYGG I PRPHD  L Y+GGDT+I  VDR+    S++A+LS+        T KYQLP EDLD+LISVT D+DL++M+ EYDR   A    +P+R
Subjt:  KVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSS--FCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG--RPAR

Query:  MRLFLF
        +RLFLF
Subjt:  MRLFLF

AT4G05150.1 Octicosapeptide/Phox/Bem1p family protein7.0e-2753.64Show/hide
Query:  SNYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFC-DADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG-RPA
        S  +V+FMC++GG+I PRP DN L YVGGD ++ AV R   FAS+L+KL+     ++++ KYQLP EDLDALISV+ D+D+E+MM EYDR+ +    R +
Subjt:  SNYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFC-DADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG-RPA

Query:  RMRLFLFPAN
        R+RLFLF  N
Subjt:  RMRLFLFPAN

AT5G09620.1 Octicosapeptide/Phox/Bem1p family protein3.5e-4269.64Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCD-----ADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGR
        NYKVK MCSYGGKI PRPHDN L+YV GDTKI +VDR I+F ++++KLS+ C       +++FKYQLPGEDLDALISVTND+DLEHMMHEYDRL R   +
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCD-----ADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGR

Query:  PARMRLFLFPAN
        PARMRLFLFP++
Subjt:  PARMRLFLFPAN

AT5G49920.1 Octicosapeptide/Phox/Bem1p family protein1.2e-2651.43Show/hide
Query:  KVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMRLF
        KVKFMCS+GG+I PRP D+VL YVGG+T++ AV   I F+ ++ KL++  + D+  KYQ+  EDLDAL+SV +D+D++HM+ EY+R +  P    ++R F
Subjt:  KVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMRLF

Query:  LFPAN
        LFPAN
Subjt:  LFPAN

AT5G64430.1 Octicosapeptide/Phox/Bem1p family protein1.2e-4271.68Show/hide
Query:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFC------DADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG
        +YKVKFMCSYGGKI PRPHDN L+YV G+TKI +VDR I+F  + +KLS+ C        +VTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRL R   
Subjt:  NYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFC------DADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPG

Query:  RPARMRLFLFPAN
        +PARMRLFLFPA+
Subjt:  RPARMRLFLFPAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCAACTACAAGGTCAAGTTCATGTGCAGCTATGGCGGCAAGATCCACCCCCGCCCCCACGACAACGTCCTCTCCTACGTCGGCGGCGACACCAAGATCTTCGCCGTCGA
CCGCTCCATCAAATTCGCCTCTATGTTGGCTAAGCTCTCCTCCTTCTGCGACGCCGATGTCACCTTCAAGTACCAGCTCCCCGGCGAGGATCTCGACGCCCTGATTTCGG
TCACCAACGACGACGATCTCGAGCACATGATGCACGAGTACGATCGCCTCTACAGGGCACCCGGGAGGCCGGCGCGGATGCGGCTTTTTCTGTTTCCGGCTAATCAGAGC
CCTAGC
mRNA sequenceShow/hide mRNA sequence
TCCAACTACAAGGTCAAGTTCATGTGCAGCTATGGCGGCAAGATCCACCCCCGCCCCCACGACAACGTCCTCTCCTACGTCGGCGGCGACACCAAGATCTTCGCCGTCGA
CCGCTCCATCAAATTCGCCTCTATGTTGGCTAAGCTCTCCTCCTTCTGCGACGCCGATGTCACCTTCAAGTACCAGCTCCCCGGCGAGGATCTCGACGCCCTGATTTCGG
TCACCAACGACGACGATCTCGAGCACATGATGCACGAGTACGATCGCCTCTACAGGGCACCCGGGAGGCCGGCGCGGATGCGGCTTTTTCTGTTTCCGGCTAATCAGAGC
CCTAGC
Protein sequenceShow/hide protein sequence
SNYKVKFMCSYGGKIHPRPHDNVLSYVGGDTKIFAVDRSIKFASMLAKLSSFCDADVTFKYQLPGEDLDALISVTNDDDLEHMMHEYDRLYRAPGRPARMRLFLFPANQS
PS