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MS006502 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006502
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold404:427543..427746
RNA-Seq ExpressionMS006502
SyntenyMS006502
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051433.1 hypothetical protein E6C27_scaffold55G001850 [Cucumis melo var. makuwa]1.1e-0541.94Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI
        GW+++ +LPL++  +   + I  H  GL   AS+TLNL + ++AWIQV+ N C F+P +I+I
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI

KAA0062494.1 uncharacterized protein E6C27_scaffold130G00900 [Cucumis melo var. makuwa]5.1e-0642.03Show/hide
Query:  GWVRVCDLPL-EFNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS
        GW+++ +LPL ++ +  F+ IG HL GL  IA +TLNL +CS A IQV+ N C F+ ++ +I     G+
Subjt:  GWVRVCDLPL-EFNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS

KAA0063414.1 uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa]1.0e-0643.55Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI
        GW+ + +LPL++ +   +KAIG    G +SI+ KT+NL++CS+A I+V  N C FLPA +++
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI

XP_031738083.1 uncharacterized protein LOC116402658 [Cucumis sativus]3.0e-0642.03Show/hide
Query:  GWVRVCDLPLE-FNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS
        GW++V +LPL+ +++  F+AIG H  G   IA++TLNL +CS+A IQV+ N C F+ ++ +I+    G+
Subjt:  GWVRVCDLPLE-FNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS

XP_038904899.1 uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]2.7e-0743.48Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS
        GW+ + +LPL++  KQ F+AIG +  GL+SIA + LNL+    A I+V++N C F+PA+I++++   GS
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS

TrEMBL top hitse value%identityAlignment
A0A5A7T365 Uncharacterized protein1.4e-0441.27Show/hide
Query:  WVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIAS
        W+++  L L++  +  F+ IG H  GL  IAS+TLNL + S+A IQV+   C F+P++I+I +
Subjt:  WVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIAS

A0A5A7U6A9 Uncharacterized protein5.5e-0641.94Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI
        GW+++ +LPL++  +   + I  H  GL   AS+TLNL + ++AWIQV+ N C F+P +I+I
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI

A0A5A7V878 DUF4283 domain-containing protein5.0e-0743.55Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI
        GW+ + +LPL++ +   +KAIG    G +SI+ KT+NL++CS+A I+V  N C FLPA +++
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI

A0A5D3BI91 Putative 3,4-dihydroxy-2-butanone kinase isoform X57.2e-0643.55Show/hide
Query:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI
        GW+++ +LPL++  +   + IG H  GL  IA +TLNL + S+A IQV+ N C F+P++I+I
Subjt:  GWVRVCDLPLEF-NKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKI

A0A5D3DVS9 Uncharacterized protein2.5e-0642.03Show/hide
Query:  GWVRVCDLPL-EFNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS
        GW+++ +LPL ++ +  F+ IG HL GL  IA +TLNL +CS A IQV+ N C F+ ++ +I     G+
Subjt:  GWVRVCDLPL-EFNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTTGGGTGAGAGTTTGTGACTTACCTCTAGAATTCAATAAGCAGTGTTTCAAGGCTATTGGAACTCATCTCGTAGGTCTGAAGAGTATTGCGTCTAAAACCCTTAATTT
ATTGGATTGCTCAAAAGCTTGGATTCAAGTAGAAGACAACTTTTGTCGGTTTTTACCTGCTTCGATCAAGATTGCTTCTCCTCCTTTGGGTTCC
mRNA sequenceShow/hide mRNA sequence
GGTTGGGTGAGAGTTTGTGACTTACCTCTAGAATTCAATAAGCAGTGTTTCAAGGCTATTGGAACTCATCTCGTAGGTCTGAAGAGTATTGCGTCTAAAACCCTTAATTT
ATTGGATTGCTCAAAAGCTTGGATTCAAGTAGAAGACAACTTTTGTCGGTTTTTACCTGCTTCGATCAAGATTGCTTCTCCTCCTTTGGGTTCC
Protein sequenceShow/hide protein sequence
GWVRVCDLPLEFNKQCFKAIGTHLVGLKSIASKTLNLLDCSKAWIQVEDNFCRFLPASIKIASPPLGS