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MS006510 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006510
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold404:557585..557833
RNA-Seq ExpressionMS006510
SyntenyMS006510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571864.1 hypothetical protein SDJN03_28592, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0649.43Show/hide
Query:  VVAAFIAAFV--VSSLASSSSFGGRKLLASDFPEFPDLSNVPPFYPEFKLPPPFF-------TSFGPNVPSSFPNFPIFSPPTNPSP
        V   F+++F    SS +SSS    RKLLA + P+      VPP  P F LPPPF        +S  PN+PSSFPNFP F PPTNPSP
Subjt:  VVAAFIAAFV--VSSLASSSSFGGRKLLASDFPEFPDLSNVPPFYPEFKLPPPFF-------TSFGPNVPSSFPNFPIFSPPTNPSP
KGN43761.1 hypothetical protein Csa_017175 [Cucumis sativus]9.3e-1868.18Show/hide
Query:  ARFGVVAAFIAAFVVSSLASSSSFG-----GRKLLASDFPEFPDLSNVPPFYPEFKLPPPFFTSFGPNVPSS-FPNFPIFSPPTNPSP
        ARF ++ AF+A  ++SSL+SSSS        RKLLASDFP  PD  NVPPFYPEFKLPPP F+ FGPN PSS FPNFP FSPPTNPSP
Subjt:  ARFGVVAAFIAAFVVSSLASSSSFG-----GRKLLASDFPEFPDLSNVPPFYPEFKLPPPFFTSFGPNVPSS-FPNFPIFSPPTNPSP
TrEMBL top hitse value%identityAlignment
A0A0A0K7G8 Uncharacterized protein4.5e-1868.18Show/hide
Query:  ARFGVVAAFIAAFVVSSLASSSSFG-----GRKLLASDFPEFPDLSNVPPFYPEFKLPPPFFTSFGPNVPSS-FPNFPIFSPPTNPSP
        ARF ++ AF+A  ++SSL+SSSS        RKLLASDFP  PD  NVPPFYPEFKLPPP F+ FGPN PSS FPNFP FSPPTNPSP
Subjt:  ARFGVVAAFIAAFVVSSLASSSSFG-----GRKLLASDFPEFPDLSNVPPFYPEFKLPPPFFTSFGPNVPSS-FPNFPIFSPPTNPSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGGCTCGATTCGGGGTTGTGGCTGCCTTTATCGCTGCATTCGTGGTCTCAAGCTTGGCTTCTTCTTCTTCTTTCGGAGGTCGTAAGCTTTTGGCTTCAGACTTTCCCGA
GTTTCCCGACCTGAGCAATGTTCCTCCATTTTACCCCGAATTCAAATTACCTCCACCTTTCTTCACTTCTTTTGGCCCCAATGTTCCCTCTTCTTTCCCCAACTTTCCCA
TCTTCTCCCCTCCCACCAATCCTTCCCCT
mRNA sequenceShow/hide mRNA sequence
TCGGCTCGATTCGGGGTTGTGGCTGCCTTTATCGCTGCATTCGTGGTCTCAAGCTTGGCTTCTTCTTCTTCTTTCGGAGGTCGTAAGCTTTTGGCTTCAGACTTTCCCGA
GTTTCCCGACCTGAGCAATGTTCCTCCATTTTACCCCGAATTCAAATTACCTCCACCTTTCTTCACTTCTTTTGGCCCCAATGTTCCCTCTTCTTTCCCCAACTTTCCCA
TCTTCTCCCCTCCCACCAATCCTTCCCCT
Protein sequenceShow/hide protein sequence
SARFGVVAAFIAAFVVSSLASSSSFGGRKLLASDFPEFPDLSNVPPFYPEFKLPPPFFTSFGPNVPSSFPNFPIFSPPTNPSP