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MS006516 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006516
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionB3 domain-containing protein Os01g0905400-like isoform X1
Genome locationscaffold404:687000..687131
RNA-Seq ExpressionMS006516
SyntenyMS006516
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573105.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0568.89Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATV  L NKKVVLEDSLG   KVTV  CEGSL F++GW V SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
KAG7012291.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-0568.89Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATV  L NKKVVLEDSLG   KVTV  CEGSL F++GW V SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
XP_022137099.1 B3 domain-containing protein Os01g0905400-like [Momordica charantia]1.3e-0777.78Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATVPMLANKKVVLEDSLG   KVTV  CEGSL FKKGW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
XP_022954820.1 uncharacterized protein LOC111456966 [Cucurbita moschata]6.2e-0566.67Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F +TV  L NKKVVLEDSLG   KVTV  CEGSL F++GW V SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
XP_023542633.1 uncharacterized protein LOC111802479 [Cucurbita pepo subsp. pepo]8.1e-0566.67Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATV  L NKKVVLEDSLG   KVTV  CEGSL F++GW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
TrEMBL top hitse value%identityAlignment
A0A6J1C7A5 B3 domain-containing protein Os01g0905400-like6.5e-0877.78Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATVPMLANKKVVLEDSLG   KVTV  CEGSL FKKGW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
A0A6J1GTH2 uncharacterized protein LOC1114569663.0e-0566.67Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F +TV  L NKKVVLEDSLG   KVTV  CEGSL F++GW V SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
A0A6J1K243 uncharacterized protein LOC1114899783.9e-0566.67Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F ATV  L NKKVVLEDSLG   KVTV  CEGSL F++GW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
A0A6J1KGU5 B3 domain-containing protein Os01g0905400-like isoform X11.1e-0464.44Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F +TV  L NKKVVLEDSLG   KVTV  CEGSL F++GW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
A0A6J1KJC3 uncharacterized protein LOC111495140 isoform X21.1e-0464.44Show/hide
Query:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
        F +TV  L NKKVVLEDSLG   KVTV  CEGSL F++GW   SS
Subjt:  FCATVPMLANKKVVLEDSLG--GKVTVFYCEGSLTFKKGWIVVSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTTTTGTGCTACGGTGCCAATGCTGGCAAATAAAAAGGTTGTTCTTGAAGATTCACTTGGAGGGAAGGTAACAGTTTTCTACTGTGAAGGATCTCTTACCTTTAAAAA
AGGGTGGATTGTTGTTTCATCG
mRNA sequenceShow/hide mRNA sequence
TGTTTTTGTGCTACGGTGCCAATGCTGGCAAATAAAAAGGTTGTTCTTGAAGATTCACTTGGAGGGAAGGTAACAGTTTTCTACTGTGAAGGATCTCTTACCTTTAAAAA
AGGGTGGATTGTTGTTTCATCG
Protein sequenceShow/hide protein sequence
CFCATVPMLANKKVVLEDSLGGKVTVFYCEGSLTFKKGWIVVSS