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MS006520 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006520
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/threonine-protein phosphatase 7 long form homolog isoform X1
Genome locationscaffold404:710784..710993
RNA-Seq ExpressionMS006520
SyntenyMS006520
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646947.1 hypothetical protein Csa_020816 [Cucumis sativus]4.0e-1452.94Show/hide
Query:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        + C+TD  LHQIDL GKHD +W R HA +I++W  R   CA ++AT  P VSD+Y  WY SITR+++T
Subjt:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

XP_016902435.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo]5.8e-1354.55Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        CNT+ +LH+IDL GKHD +W + H  YI+ W  R E C    AT+ P VSDDY  WY SITR++IT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

XP_022152173.1 serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica charantia]3.1e-1459.7Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDA-TDMPAVSDDYQQWYDSITRKYIT
        CNTDT LHQ+DL G++D++W+R+HA YIS W  RRE CA      D   VSDDY  WY+SITR+YIT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDA-TDMPAVSDDYQQWYDSITRKYIT

XP_031742668.1 serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]4.0e-1452.94Show/hide
Query:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        + C+TD  LHQIDL GKHD +W R HA +I++W  R   CA ++AT  P VSD+Y  WY SITR+++T
Subjt:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

XP_031743818.1 serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]8.9e-1452.94Show/hide
Query:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        + C+TD  LHQIDL GKHD +W R HA +I++W  R   CA ++AT  P VSD+Y  WY SITR+++T
Subjt:  QLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

TrEMBL top hitse value%identityAlignment
A0A1S3CBQ7 serine/threonine-protein phosphatase 7 long form homolog isoform X22.8e-1354.55Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        CNT+ +LH+IDL GKHD +W + H  YI+ W  R E C    AT+ P VSDDY  WY SITR++IT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

A0A1S4E383 serine/threonine-protein phosphatase 7 long form homolog isoform X12.8e-1354.55Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        CNT+ +LH+IDL GKHD +W + H  YI+ W  R E C    AT+ P VSDDY  WY SITR++IT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

A0A5A7TD03 Serine/threonine-protein phosphatase 7 long form-like protein isoform X12.8e-1354.55Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        CNT+ +LH+IDL GKHD +W + H  YI+ W  R E C    AT+ P VSDDY  WY SITR++IT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

A0A5A7TY99 Serine/threonine-protein phosphatase 7 long form-like protein isoform X11.1e-0950Show/hide
Query:  TDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT
        TD  LHQIDL GKHD +W+R HA +I +W  R +    +  T  P VS++Y  WY SITR++IT
Subjt:  TDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT

A0A6J1DE57 serine/threonine-protein phosphatase 7 long form homolog isoform X11.5e-1459.7Show/hide
Query:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDA-TDMPAVSDDYQQWYDSITRKYIT
        CNTDT LHQ+DL G++D++W+R+HA YIS W  RRE CA      D   VSDDY  WY+SITR+YIT
Subjt:  CNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDA-TDMPAVSDDYQQWYDSITRKYIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGTACAGTTATGTAATACTGACACGAGTCTACATCAGATCGACCTACCAGGAAAACATGATCACAATTGGCAACGTCAACATGCAGCATATATATCACTATGGCGTCA
GCGTCGTGAACGGTGTGCATTTAGTGATGCGACAGATATGCCGGCCGTGTCAGATGATTATCAACAGTGGTATGATTCTATTACAAGAAAGTATATCACA
mRNA sequenceShow/hide mRNA sequence
ATTGTACAGTTATGTAATACTGACACGAGTCTACATCAGATCGACCTACCAGGAAAACATGATCACAATTGGCAACGTCAACATGCAGCATATATATCACTATGGCGTCA
GCGTCGTGAACGGTGTGCATTTAGTGATGCGACAGATATGCCGGCCGTGTCAGATGATTATCAACAGTGGTATGATTCTATTACAAGAAAGTATATCACA
Protein sequenceShow/hide protein sequence
IVQLCNTDTSLHQIDLPGKHDHNWQRQHAAYISLWRQRRERCAFSDATDMPAVSDDYQQWYDSITRKYIT