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MS006533 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006533
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit alpha
Genome locationscaffold404:866839..867045
RNA-Seq ExpressionMS006533
SyntenyMS006533
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR000793 - ATP synthase, alpha subunit, C-terminal
IPR038376 - ATP synthase, alpha subunit, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AGM34825.1 Atp1, partial [Emmenopterys henryi]2.1e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

AUD38668.1 ATP synthase F1 subunit 1 [Luculia grandifolia]2.1e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

AUD38685.1 ATP synthase F1 subunit 1 [Anthospermum spathulatum]2.1e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

VAI43496.1 unnamed protein product [Triticum turgidum subsp. durum]1.6e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLSISCV   AQLKAMKQVCGSSKLELAQYREV AFAQFGSDL+A TQALLNRGA LT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

XP_040246241.1 ATP synthase subunit alpha, mitochondrial-like [Aegilops tauschii subsp. strangulata]2.1e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

TrEMBL top hitse value%identityAlignment
A0A1C9ZNX9 ATP synthase subunit alpha1.0e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

A0A224AUA8 ATP synthase subunit alpha1.0e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

A0A446V6N2 ATP synthase subunit alpha, mitochondrial7.7e-2488.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLSISCV   AQLKAMKQVCGSSKLELAQYREV AFAQFGSDL+A TQALLNRGA LT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

K3Z2G6 ATP synthase subunit alpha1.0e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

Q332R4 ATP synthase subunit alpha1.0e-2388.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

SwissProt top hitse value%identityAlignment
P05494 ATP synthase subunit alpha, mitochondrial2.7e-2688.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

P12862 ATP synthase subunit alpha, mitochondrial8.0e-2687.5Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A +QALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

P22201 ATP synthase subunit alpha, mitochondrial2.7e-2688.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

P68541 ATP synthase subunit alpha, mitochondrial2.7e-2688.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

P68542 ATP synthase subunit alpha, mitochondrial2.7e-2688.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.9e-2788.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

ATCG00120.1 ATP synthase subunit alpha1.9e-1461.43Show/hide
Query:  GIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        GIRPAINVG+S+S V   AQ+KAMKQV G  KLELAQ+ E+ AF+QF SDL+  TQ  L RG RL ++ K
Subjt:  GIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK

ATMG01190.1 ATP synthase subunit 11.9e-2788.89Show/hide
Query:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK
        YRGIRPAINVGLS+S V   AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDL+A TQALLNRGARLT+VPK
Subjt:  YRGIRPAINVGLSISCV---AQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATCGCGGAATTAGACCAGCTATTAACGTCGGCTTATCTATCAGTTGCGTCGCTCAGTTGAAAGCTATGAAACAAGTTTGCGGTAGTTCAAAACTGGAATTAGCACAATA
TCGCGAAGTGGCCGCCTTTGCTCAATTTGGGTCAGACCTTAATGCTCTGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAAAAGTACCAAAA
mRNA sequenceShow/hide mRNA sequence
TATCGCGGAATTAGACCAGCTATTAACGTCGGCTTATCTATCAGTTGCGTCGCTCAGTTGAAAGCTATGAAACAAGTTTGCGGTAGTTCAAAACTGGAATTAGCACAATA
TCGCGAAGTGGCCGCCTTTGCTCAATTTGGGTCAGACCTTAATGCTCTGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAAAAGTACCAAAA
Protein sequenceShow/hide protein sequence
YRGIRPAINVGLSISCVAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLNALTQALLNRGARLTKVPK