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MS006548 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006548
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold404:1123136..1123393
RNA-Seq ExpressionMS006548
SyntenyMS006548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131661.1 uncharacterized protein LOC111004786 [Momordica charantia]4.2e-1348.24Show/hide
Query:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAISHPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
        RNS  HG  +S P +RC+WI SY  NY QAQ     SP+  S P    RW P   S++K+N D ACRS   G+ LIIRD  G L+
Subjt:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAISHPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.6e-1044.19Show/hide
Query:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAIS-HPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
        RNS +HGKQ+S  + +C+W+  +L+++ QAQ     SPR  S H  + Q W+PS+  SLK+N D ACR        IIRD S SL+
Subjt:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAIS-HPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
TrEMBL top hitse value%identityAlignment
A0A6J1BQ49 uncharacterized protein LOC1110047862.0e-1348.24Show/hide
Query:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAISHPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
        RNS  HG  +S P +RC+WI SY  NY QAQ     SP+  S P    RW P   S++K+N D ACRS   G+ LIIRD  G L+
Subjt:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAISHPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
A0A6J1DX30 uncharacterized protein LOC1110248742.7e-1044.19Show/hide
Query:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAIS-HPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
        RNS +HGKQ+S  + +C+W+  +L+++ QAQ     SPR  S H  + Q W+PS+  SLK+N D ACR        IIRD S SL+
Subjt:  RNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAIS-HPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTCGCAATTCCTCGCTTCATGGGAAACAAATCTCCTTTCCTGACATCAGATGTGATTGGATTCTGTCGTACCTCAACAACTACAGGCAAGCTCAGGCAAGAATCACTGC
CTCACCGAGGGCGATTTCTCACCCCCAAATCCCTCAACGGTGGAAGCCTTCCACAGGTAGCTCTCTCAAAATCAACAAAGACGTTGCATGCCGAAGTATCGTAAGAGGCA
TTAGACTGATTATTCGGGACCCAAGTGGTTCTCTAATC
mRNA sequenceShow/hide mRNA sequence
CGTCGCAATTCCTCGCTTCATGGGAAACAAATCTCCTTTCCTGACATCAGATGTGATTGGATTCTGTCGTACCTCAACAACTACAGGCAAGCTCAGGCAAGAATCACTGC
CTCACCGAGGGCGATTTCTCACCCCCAAATCCCTCAACGGTGGAAGCCTTCCACAGGTAGCTCTCTCAAAATCAACAAAGACGTTGCATGCCGAAGTATCGTAAGAGGCA
TTAGACTGATTATTCGGGACCCAAGTGGTTCTCTAATC
Protein sequenceShow/hide protein sequence
RRNSSLHGKQISFPDIRCDWILSYLNNYRQAQARITASPRAISHPQIPQRWKPSTGSSLKINKDVACRSIVRGIRLIIRDPSGSLI