; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006549 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006549
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncopper-transporting ATPase PAA1, chloroplastic-like
Genome locationscaffold404:1127626..1128842
RNA-Seq ExpressionMS006549
SyntenyMS006549
Gene Ontology termsGO:0035434 - copper ion transmembrane transport (biological process)
GO:0055070 - copper ion homeostasis (biological process)
GO:0016020 - membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
GO:0043682 - copper transmembrane transporter activity, phosphorylative mechanism (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR017969 - Heavy-metal-associated, conserved site
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011404.1 Copper-transporting ATPase PAA1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-5374.85Show/hide
Query:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV
        S+S SP  IS +S + R ++P            PLHRR KF+S  +SGNGNGGVR ES  GGGGGGDDGGPDGGD  S LLA EAE DA LSAD IVL V
Subjt:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV

Query:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        GGMTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

XP_022142006.1 copper-transporting ATPase PAA1, chloroplastic-like [Momordica charantia]2.4e-6387.12Show/hide
Query:  ISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC
        ISPIS     ++P        VP  PLHRRFKFVSKFASGNGNGGVRDES    GGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC
Subjt:  ISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC

Query:  SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

XP_022963522.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moschata]2.3e-5374.85Show/hide
Query:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV
        S+S SP  IS +S + R ++P            PLHRR KF+S  +SGNGNGGVR ES  GGGGGGDDGGPDGGD  S LLA EAE DA LSAD IVL V
Subjt:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV

Query:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        GGMTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

XP_022963523.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita moschata]2.3e-5374.85Show/hide
Query:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV
        S+S SP  IS +S + R ++P            PLHRR KF+S  +SGNGNGGVR ES  GGGGGGDDGGPDGGD  S LLA EAE DA LSAD IVL V
Subjt:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV

Query:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        GGMTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

XP_038887264.1 copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida]9.2e-5576.33Show/hide
Query:  PDLISPISP---AFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG
        P  ISPIS    + R SLP            PLHRR KF+S F+SGNGNGGVR E+  GGGGGGDDGGPDG D +SKLLA EA+ DATLSADVIVL VGG
Subjt:  PDLISPISP---AFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGG

Query:  MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        MTC GCSASVKRILESQPQVS ASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSSKVQG
Subjt:  MTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

TrEMBL top hitse value%identityAlignment
A0A1S3BZZ1 copper-transporting ATPase PAA1, chloroplastic-like1.1e-5373.99Show/hide
Query:  PPSISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVL
        P S   S   IS +S   R +LP            P+HRR KFVS FASGNGNGGVR ES GGGGGGGDDGGP+G D +SKLLA EA+ DATLSADVIV+
Subjt:  PPSISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVL

Query:  DVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
         VGGMTC GC ASVKRILESQPQVS ASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSSKVQG
Subjt:  DVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

A0A5A7SK85 Copper-transporting ATPase PAA11.1e-5373.99Show/hide
Query:  PPSISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVL
        P S   S   IS +S   R +LP            P+HRR KFVS FASGNGNGGVR ES GGGGGGGDDGGP+G D +SKLLA EA+ DATLSADVIV+
Subjt:  PPSISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVL

Query:  DVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
         VGGMTC GC ASVKRILESQPQVS ASVDLASETA+VWPVAEAKITPNWREELG ALAKHLTTCGFSSKVQG
Subjt:  DVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

A0A6J1CKX0 copper-transporting ATPase PAA1, chloroplastic-like1.2e-6387.12Show/hide
Query:  ISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC
        ISPIS     ++P        VP  PLHRRFKFVSKFASGNGNGGVRDES    GGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC
Subjt:  ISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGC

Query:  SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  SASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

A0A6J1HFH1 copper-transporting ATPase PAA1, chloroplastic-like isoform X11.1e-5374.85Show/hide
Query:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV
        S+S SP  IS +S + R ++P            PLHRR KF+S  +SGNGNGGVR ES  GGGGGGDDGGPDGGD  S LLA EAE DA LSAD IVL V
Subjt:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV

Query:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        GGMTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

A0A6J1HI09 copper-transporting ATPase PAA1, chloroplastic-like isoform X21.1e-5374.85Show/hide
Query:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV
        S+S SP  IS +S + R ++P            PLHRR KF+S  +SGNGNGGVR ES  GGGGGGDDGGPDGGD  S LLA EAE DA LSAD IVL V
Subjt:  SISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDV

Query:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG
        GGMTC GCSASVKRILESQPQVS ASVDLASETAVVWP AEAKITPNWREELGEALAKHLTTCGFSSKVQG
Subjt:  GGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG

SwissProt top hitse value%identityAlignment
B9DFX7 Copper-transporting ATPase PAA2, chloroplastic1.7e-0643.84Show/hide
Query:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK
        I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+LAK LT  GF +K
Subjt:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK

Q9SZC9 Copper-transporting ATPase PAA1, chloroplastic4.8e-3060.33Show/hide
Query:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP
        S  G  G    +GG GGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+ILESQPQV+ ASV+L +ETA+VWPV EAK  P
Subjt:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP

Query:  NWREELGEALAKHLTTCGFSS
        +W++ LGE LA HLT CGF S
Subjt:  NWREELGEALAKHLTTCGFSS

Arabidopsis top hitse value%identityAlignment
AT4G33520.1 P-type ATP-ase 18.9e-3259.2Show/hide
Query:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP
        S  G  G    +GG GGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+ILESQPQV+ ASV+L +ETA+VWPV EAK  P
Subjt:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP

Query:  NWREELGEALAKHLTTCGFSSKVQG
        +W++ LGE LA HLT CGF S  +G
Subjt:  NWREELGEALAKHLTTCGFSSKVQG

AT4G33520.2 P-type ATP-ase 13.4e-3160.33Show/hide
Query:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP
        S  G  G    +GG GGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+ILESQPQV+ ASV+L +ETA+VWPV EAK  P
Subjt:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP

Query:  NWREELGEALAKHLTTCGFSS
        +W++ LGE LA HLT CGF S
Subjt:  NWREELGEALAKHLTTCGFSS

AT4G33520.3 P-type ATP-ase 13.4e-3160.33Show/hide
Query:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP
        S  G  G    +GG GGGGG  GG + GD++SKL A  ++G +  S+D+I+LDVGGMTC GCSASVK+ILESQPQV+ ASV+L +ETA+VWPV EAK  P
Subjt:  SGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITP

Query:  NWREELGEALAKHLTTCGFSS
        +W++ LGE LA HLT CGF S
Subjt:  NWREELGEALAKHLTTCGFSS

AT5G21930.1 P-type ATPase of Arabidopsis 21.2e-0743.84Show/hide
Query:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK
        I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+LAK LT  GF +K
Subjt:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK

AT5G21930.2 P-type ATPase of Arabidopsis 21.2e-0743.84Show/hide
Query:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK
        I+LDV GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T     +  E+LAK LT  GF +K
Subjt:  IVLDVGGMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCCTCCAATCTGCCTCTCTCCTCCCTCAATTTCCGCTTCTCCGGACCTAATTTCACCCATTTCACCTGCATTTCGCCTATCTCTGCCATTCACTCGCCCACCGTTCCG
CTGCGTGCCGCTGTTCCCCCTCCACCGTCGTTTTAAATTCGTCTCCAAATTTGCTTCTGGCAACGGAAATGGCGGCGTTCGAGATGAGAGCGGCGGCGGCGGCGGCGGCG
GTGGGGATGACGGTGGGCCTGACGGTGGCGATGCCGAGTCCAAATTGCTTGCGGAAGAAGCTGAGGGCGATGCGACGCTGTCCGCAGACGTCATTGTTCTGGATGTTGGA
GGAATGACATGCATGGGGTGTTCGGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACAAGCTAGTGTTGACCTTGCTTCGGAGACAGCAGTCGTGTGGCC
TGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTGGGAGAGGCACTTGCCAAGCATTTGACTACTTGTGGTTTTTCGTCTAAGGTTCAAGGT
mRNA sequenceShow/hide mRNA sequence
TTGCCTCCAATCTGCCTCTCTCCTCCCTCAATTTCCGCTTCTCCGGACCTAATTTCACCCATTTCACCTGCATTTCGCCTATCTCTGCCATTCACTCGCCCACCGTTCCG
CTGCGTGCCGCTGTTCCCCCTCCACCGTCGTTTTAAATTCGTCTCCAAATTTGCTTCTGGCAACGGAAATGGCGGCGTTCGAGATGAGAGCGGCGGCGGCGGCGGCGGCG
GTGGGGATGACGGTGGGCCTGACGGTGGCGATGCCGAGTCCAAATTGCTTGCGGAAGAAGCTGAGGGCGATGCGACGCTGTCCGCAGACGTCATTGTTCTGGATGTTGGA
GGAATGACATGCATGGGGTGTTCGGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACAAGCTAGTGTTGACCTTGCTTCGGAGACAGCAGTCGTGTGGCC
TGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTGGGAGAGGCACTTGCCAAGCATTTGACTACTTGTGGTTTTTCGTCTAAGGTTCAAGGT
Protein sequenceShow/hide protein sequence
LPPICLSPPSISASPDLISPISPAFRLSLPFTRPPFRCVPLFPLHRRFKFVSKFASGNGNGGVRDESGGGGGGGGDDGGPDGGDAESKLLAEEAEGDATLSADVIVLDVG
GMTCMGCSASVKRILESQPQVSQASVDLASETAVVWPVAEAKITPNWREELGEALAKHLTTCGFSSKVQG