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MS006553 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006553
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTropomyosin-like
Genome locationscaffold404:1196391..1200494
RNA-Seq ExpressionMS006553
SyntenyMS006553
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142007.1 uncharacterized protein LOC111012242 [Momordica charantia]3.5e-6899.32Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]2.3e-6493.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLG  +
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
XP_022963476.1 uncharacterized protein LOC111463800 isoform X2 [Cucurbita moschata]1.1e-6495.21Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLGA
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
XP_022967634.1 uncharacterized protein LOC111467076 isoform X1 [Cucurbita maxima]5.2e-6493.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLG  K
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]1.4e-6493.92Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFA+ASLCS+QAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELR KQEEIDKRDKDIKLLEAIIQTLG  +
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
TrEMBL top hitse value%identityAlignment
A0A6J1CLE5 uncharacterized protein LOC1110122421.7e-6899.32Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
A0A6J1HG82 uncharacterized protein LOC111463800 isoform X25.1e-6595.21Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLGA
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
A0A6J1HI40 uncharacterized protein LOC111463800 isoform X11.1e-6493.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWSGAVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLG  +
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
A0A6J1HV17 uncharacterized protein LOC111467076 isoform X23.3e-6494.52Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLGA
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGA
A0A6J1HXA5 uncharacterized protein LOC111467076 isoform X12.5e-6493.24Show/hide
Query:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK
        MEDKGKGTDRWS AVAN+TEMASNLESLQK+L+KKAVYVDDETFA+ASLCSEQAR IKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV+
Subjt:  MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVK

Query:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        EVTRELENTTKVFQLHMDELRAKQEEI+KRDKDIKLLEAIIQTLG  K
Subjt:  EVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64180.1 unknown protein1.4e-5173.15Show/hide
Query:  MEDKGKGTD-RWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV
        ME++  G+D RW G++ N+TEMASNL+SLQKLLLKKAV+V+++TF++ASL SEQAR IKVLEQRV+TLERELDAAITAAAHARSEKRQAE++QKAAE   
Subjt:  MEDKGKGTD-RWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHV

Query:  KEVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK
        ++VT+ELENTTKVF+LHM+ELR  QE+I KRD +IKLLEAIIQTLG  +
Subjt:  KEVTRELENTTKVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCTTCCAATTTGGAATCACTCCAGAAGCTTCTACTGAAGAAAGCCGT
ATATGTGGACGACGAGACGTTTGCCAAAGCTTCGTTGTGCTCCGAACAAGCAAGAATGATCAAGGTTCTCGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTG
CCATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCTCAAAAGGCTGCTGAACTACATGTGAAGGAGGTCACTAGAGAGCTCGAGAACACCACA
AAGGTATTTCAACTGCATATGGATGAATTGCGGGCAAAGCAAGAGGAAATTGACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGTGCCAA
TAAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACAAGGGTAAAGGAACGGACAGATGGAGCGGTGCTGTAGCCAATCTCACAGAGATGGCTTCCAATTTGGAATCACTCCAGAAGCTTCTACTGAAGAAAGCCGT
ATATGTGGACGACGAGACGTTTGCCAAAGCTTCGTTGTGCTCCGAACAAGCAAGAATGATCAAGGTTCTCGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTG
CCATCACTGCTGCTGCTCATGCTCGTTCAGAAAAACGTCAGGCTGAGGCAGCTCAAAAGGCTGCTGAACTACATGTGAAGGAGGTCACTAGAGAGCTCGAGAACACCACA
AAGGTATTTCAACTGCATATGGATGAATTGCGGGCAAAGCAAGAGGAAATTGACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAGACTCTTGGTGCCAA
TAAA
Protein sequenceShow/hide protein sequence
MEDKGKGTDRWSGAVANLTEMASNLESLQKLLLKKAVYVDDETFAKASLCSEQARMIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQKAAELHVKEVTRELENTT
KVFQLHMDELRAKQEEIDKRDKDIKLLEAIIQTLGANK