; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006557 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006557
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit b, chloroplastic
Genome locationscaffold404:1219279..1219471
RNA-Seq ExpressionMS006557
SyntenyMS006557
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA9893319.1 unnamed protein product [Spirodela intermedia]1.2e-1778.12Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
        E EA+++RVNGYSEIEREK NLIN+TS +LE+LENYKNE  +LNNKERLIKYDN FSNKPYK L
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
EFH63128.1 ATP synthase CF0 B subunit [Arabidopsis lyrata subsp. lyrata]7.6e-1277.78Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDN
        EMEADQFRVNGYSEIEREK NLINS  K+L+QLENYKNE  +L+NKE+LIK  N
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDN
KAF3771757.1 ATP synthase subunit alpha [Nymphaea thermarum]2.2e-1164.06Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENY--KNELFVLNNKERLIKYDNRFSNKPYK
        E EA++FRVNGYSEIE+EK NLIN+  ++LEQ  NY  K + F+ NNKERLI+ +N FSNKPYK
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENY--KNELFVLNNKERLIKYDNRFSNKPYK
PIA34348.1 hypothetical protein AQUCO_03800145v1 [Aquilegia coerulea]7.4e-1575Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
        +MEAD+FRVN YSEIEREK NLINS+ ++LE+LEN KNE   LNNKERLIK DN F NKPYKEL
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
YP_009183348.1 ATP synthase CF0 B subunit [Cymbidium ensifolium]1.5e-1266.67Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLEN--YKNELFVLNNKERLIKYDNRFSNKPYKEL
        E++AD++R NGYSEIE+EK NLIN+T KSLEQLE    K +LF L NKE+LI+ DN+F NKPYKEL
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLEN--YKNELFVLNNKERLIKYDNRFSNKPYKEL
TrEMBL top hitse value%identityAlignment
A0A0S1YC55 ATP synthase CF0 B subunit7.5e-1366.67Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLEN--YKNELFVLNNKERLIKYDNRFSNKPYKEL
        E++AD++R NGYSEIE+EK NLIN+T KSLEQLE    K +LF L NKE+LI+ DN+F NKPYKEL
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLEN--YKNELFVLNNKERLIKYDNRFSNKPYKEL
A0A251UXB4 Putative ATPase, F0 complex, subunit B/B' protein1.5e-1676.56Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
        E+EAD+FRVNGYSEIEREK NLI+ST K+LEQLENYKNE  +LNNK  +IK DN FSNK YKEL
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
A0A2G5CSU5 Uncharacterized protein3.6e-1575Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
        +MEAD+FRVN YSEIEREK NLINS+ ++LE+LEN KNE   LNNKERLIK DN F NKPYKEL
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL
A0A2I6BZX1 ATP synthase subunit b, chloroplastic3.1e-11100Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
D7KRC8 ATP synthase CF0 B subunit3.7e-1277.78Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDN
        EMEADQFRVNGYSEIEREK NLINS  K+L+QLENYKNE  +L+NKE+LIK  N
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDN
SwissProt top hitse value%identityAlignment
B1A921 ATP synthase subunit b, chloroplastic2.1e-1292.31Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        EMEA+QFRVNGYSEIEREK+NLINSTSK+LEQLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Q09MJ2 ATP synthase subunit b, chloroplastic6.1e-1289.74Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        E+EADQFRVNGYSEIEREKFNLINST K+L+QLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Q09X31 ATP synthase subunit b, chloroplastic4.7e-1292.31Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        E EADQFRVNGYSEIEREK NLINSTSK+LEQLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Q4VZP7 ATP synthase subunit b, chloroplastic4.2e-1397.44Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        EMEADQFRVNGYSEIEREK NLINSTSKSLEQLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Q68S20 ATP synthase subunit b, chloroplastic4.7e-1289.74Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
        EMEADQFRVNGYSEIEREK+N INSTSK+L+QLENYKNE
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNE
Arabidopsis top hitse value%identityAlignment
ATCG00130.1 ATPase, F0 complex, subunit B/B', bacterial/chloroplast1.4e-1167.35Show/hide
Query:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERL
        E EAD+FRVNGYSEIEREK NLINST K+L+QLENYKNE  +   +  +
Subjt:  EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAATGGAAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATAGAACGAGAAAAATTTAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAA
AAATGAACTATTCGTTTTGAACAACAAAGAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTC
mRNA sequenceShow/hide mRNA sequence
GAAATGGAAGCGGATCAGTTTCGAGTGAATGGATACTCTGAGATAGAACGAGAAAAATTTAATTTGATTAATTCAACTTCTAAAAGTTTGGAACAATTAGAAAATTATAA
AAATGAACTATTCGTTTTGAACAACAAAGAGCGATTAATCAAGTACGACAACAGGTTTTCCAACAAGCCTTACAAGGAGCTC
Protein sequenceShow/hide protein sequence
EMEADQFRVNGYSEIEREKFNLINSTSKSLEQLENYKNELFVLNNKERLIKYDNRFSNKPYKEL