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MS006558 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006558
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionjacalin-related lectin 5-like
Genome locationscaffold404:1222904..1223086
RNA-Seq ExpressionMS006558
SyntenyMS006558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN43709.1 hypothetical protein Csa_017051 [Cucumis sativus]1.1e-0457.81Show/hide
Query:  GSGSGSERQVYNSTSDCSNFENS---MVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK
        GS S +ER V NST   S+ E S   MVA GS G  HI RDEFE DP R+F NL A EKNE  K
Subjt:  GSGSGSERQVYNSTSDCSNFENS---MVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK

XP_022951913.1 jacalin-related lectin 5-like [Cucurbita moschata]6.6e-0552.63Show/hide
Query:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE
        S +GS  Q +NST   SN    MVA GS G+ HI+RD FE +P  YF NLHA EK++
Subjt:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE

XP_022973282.1 jacalin-related lectin 5-like [Cucurbita maxima]4.3e-0450.88Show/hide
Query:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE
        S  GS  Q +NST   SN    MVA GS G+ HI+RD  E +P  YF NLHA +KN+
Subjt:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE

TrEMBL top hitse value%identityAlignment
A0A0A0K3Z8 Uncharacterized protein5.5e-0557.81Show/hide
Query:  GSGSGSERQVYNSTSDCSNFENS---MVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK
        GS S +ER V NST   S+ E S   MVA GS G  HI RDEFE DP R+F NL A EKNE  K
Subjt:  GSGSGSERQVYNSTSDCSNFENS---MVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK

A0A6J1GJ19 jacalin-related lectin 5-like3.2e-0552.63Show/hide
Query:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE
        S +GS  Q +NST   SN    MVA GS G+ HI+RD FE +P  YF NLHA EK++
Subjt:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE

A0A6J1I742 jacalin-related lectin 5-like2.1e-0450.88Show/hide
Query:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE
        S  GS  Q +NST   SN    MVA GS G+ HI+RD  E +P  YF NLHA +KN+
Subjt:  SGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTAGCGGTAGCGGTAGCGAACGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAATTCAATGGTTGCTCTAGGAAGTAGAGGAAGTACTCATATCAATCG
AGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTGAAAAGAATGAGAATAAGAAG
mRNA sequenceShow/hide mRNA sequence
GGTAGCGGTAGCGGTAGCGAACGTCAAGTTTATAACTCTACGAGCGATTGTAGCAACTTCGAGAATTCAATGGTTGCTCTAGGAAGTAGAGGAAGTACTCATATCAATCG
AGATGAATTTGAGAAAGATCCTCCACGTTATTTTCGCAATCTTCATGCAACTGAAAAGAATGAGAATAAGAAG
Protein sequenceShow/hide protein sequence
GSGSGSERQVYNSTSDCSNFENSMVALGSRGSTHINRDEFEKDPPRYFRNLHATEKNENKK