; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006559 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006559
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCRM domain-containing protein
Genome locationscaffold404:1247568..1250530
RNA-Seq ExpressionMS006559
SyntenyMS006559
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR040286 - CRM domain-containing protein At3g25440-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571683.1 putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-15785.8Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP+SFGQS Y SCE+Q SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKE+A +E M+
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

KAG7011409.1 putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.9e-15886.09Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP+SFGQS Y SCE+Q SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+I+FYRGKNYV+PEVMSPPDTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKE+A +E MV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

XP_022141994.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Momordica charantia]5.0e-18799.7Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFR+VAVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

XP_022963469.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata]1.9e-15786.09Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP+SFGQS Y SCE+Q SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKE+A +E MV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

XP_022967603.1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima]2.6e-15986.69Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP SFGQS Y SCEHQ SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+I+FYRGKNYVQPEVMSPPDTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQF+EKLEKELEDF KHLAQFKRKKE+A VE MV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

TrEMBL top hitse value%identityAlignment
A0A0A0K5Y2 CRM domain-containing protein9.6e-15283.73Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R SL GFI LIRNVS  SL +IP SF QS +GS EHQ S+ IV  L ES S   PPGF F+RRY++ E  GGFK+WQS RHF N  VELKTD+N VRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G PS TNGS  KQ KVAKTK+SKKAKLNELR YRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+ KP VEKYDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIV+DIKPNN+IIFYRGKNYVQPEVMSPP+TLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKR+KEDA +ESMV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

A0A1S3C151 uncharacterized CRM domain-containing protein At3g25440, chloroplastic4.0e-15084.04Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R SL GF SLIRN S  SL ++P SFGQS +GSCEHQ S+ IV  L ESTS   PPG   + RY++ E  GGFK+WQS RHF N  VELKTDSN VRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G PS TNGS  KQKKVAKTKLSKK KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFE+ K VVEKYDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKPGQVHEYAEEL+RLSKGIV+DIKPNN+IIFYRGKNYVQPEVMSPPDTLSKDKA+EKY+YEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDA
        LEHTSQFIEKLEKELEDFQKHLAQFKR+KEDA
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDA

A0A6J1CKB1 uncharacterized CRM domain-containing protein At3g25440, chloroplastic2.4e-18799.7Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFR+VAVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

A0A6J1HK68 uncharacterized CRM domain-containing protein At3g25440, chloroplastic9.0e-15886.09Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP+SFGQS Y SCE+Q SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+IIFYRGKNYV+PEVMSP DTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQFIEKLEKELEDFQKHLAQFKRKKE+A +E MV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

A0A6J1HVJ0 uncharacterized CRM domain-containing protein At3g25440, chloroplastic1.3e-15986.69Show/hide
Query:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF
        R+SL GFISLIRNVSR SL NIP SFGQS Y SCEHQ SN I   LQESTSI +PPGF F++RY++ E LGGF+KWQS RHF N AVELKTDSNIVRFSF
Subjt:  RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSF

Query:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        G  S TNGSP KQKKVAK KLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEV K V+E YDPEILTEEEKH+LKRTGEK
Subjt:  GRPSVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEEL RLSKGIV+DIKPNN+I+FYRGKNYVQPEVMSPPDTLSKDKA+EKYKYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV
        LEHTSQF+EKLEKELEDF KHLAQFKRKKE+A VE MV
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV

SwissProt top hitse value%identityAlignment
A7XN92 CRM-domain containing factor CFM3, chloroplastic/mitochondrial4.9e-2034.55Show/hide
Query:  RIRYSLEKAKRKEAWLIEKLRKFEVS-KPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE
        ++ + L  A++K       L K E + +P  +   PE +T+EE+   ++ G + K F+LLGRRGVF G + NMHLHWK  E VK++ K      V   A 
Subjt:  RIRYSLEKAKRKEAWLIEKLRKFEVS-KPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELTRLSKGIVVD---IKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVE
         L   S GI+V    +    AI+ +RGKNY +P  + P + LSK KA+ +    Q  +  S+   KL +++E  +  L Q +  KE    E
Subjt:  ELTRLSKGIVVD---IKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVE

Q2R1U8 CRM-domain containing factor CFM3, chloroplastic/mitochondrial7.6e-2135.6Show/hide
Query:  RIRYSLEKAKRKEAWLIEKLRKFEVS-KPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE
        ++ + L+ A++K       L K E + KP      PE +T+EE+   ++ G + K F+LLGRRGVF G + NMHLHWK  E VK++ K    G V + A 
Subjt:  RIRYSLEKAKRKEAWLIEKLRKFEVS-KPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAE

Query:  ELTRLSKGIVVD---IKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVE
         L   S GI+V    +    AI+ +RGK+Y +P  + P + LSK KA+ +    Q  E  S  I  L + ++  +  L Q +  KE+  VE
Subjt:  ELTRLSKGIVVD---IKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVE

Q67XL4 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic4.8e-3944.2Show/hide
Query:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF
        K+ + KL  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E S+     +DPEILT EE  +  + G K KN+V +GRRG++
Subjt:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF

Query:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL
         GV+LNMHLHWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N II YRGKNYVQP  E+MSP  TL + KA++K K   +L    ++I +L
Subjt:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL

Query:  EKELEDFQKHLAQFKRKKEDAGVE
        E+EL+  Q   AQ + K++   V+
Subjt:  EKELEDFQKHLAQFKRKKEDAGVE

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic1.0e-2032.08Show/hide
Query:  KLSKKAKLNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGG
        +L  K + + ++ +++K++++ +         +++  +LEK    E  L +   +     P +   D E +T +EK+ L++ G K K F+LLGRRGVF G
Subjt:  KLSKKAKLNELRLYRLKAKKKKTS----PNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGG

Query:  VVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIK---PNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLE
         + NMHLHWK  E VK+IC        H+ AE L   S GI+V ++      AII YRGKNY +P+ + P   LSK +A+++    Q  +     + KL 
Subjt:  VVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIK---PNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLE

Query:  KELEDFQKHLAQ
          +E+  + L +
Subjt:  KELEDFQKHLAQ

Q9LT57 CRM-domain containing factor CFM9, mitochondrial6.6e-3340.57Show/hide
Query:  SVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKN
        S + G   + K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K A L++KL+K+++ +     +DPE+ T E+    K+ G K KN
Subjt:  SVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKN

Query:  FVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEH
        +V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  + RLS G+V++I     II +RG+NY QP+ + P +TL+K KA+ K ++EQ+LE 
Subjt:  FVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEH

Query:  TSQFIEKLEKEL
            I+K E++L
Subjt:  TSQFIEKLEKEL

Arabidopsis top hitse value%identityAlignment
AT2G28480.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.8e-5555.11Show/hide
Query:  PPKQKKVAKTKLSKKAK--------LNELRLYRLKAK-KKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK
        P K K + K +L  K K         N     RL  K KKK   N E RI+Y LEKAK KEA LIE+L+++EV+K    +  P  +T EE+ +LK+ G+K
Subjt:  PPKQKKVAKTKLSKKAK--------LNELRLYRLKAK-KKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEK

Query:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS
        + N+V +GRRGVFGGV+LNMHLHWKKHETVKVIC   KPGQV +YAEEL +LS G+ V+I  ++ IIFYRGK YVQP+VMSP DTLSK +A EK KYEQS
Subjt:  KKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQS

Query:  LEHTSQFIEKLEKELEDFQKHLAQF
        LE    FI   EKELE + +H+A +
Subjt:  LEHTSQFIEKLEKELEDFQKHLAQF

AT3G25440.1 RNA-binding CRS1 / YhbY (CRM) domain protein3.4e-4044.2Show/hide
Query:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF
        K+ + KL  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E S+     +DPEILT EE  +  + G K KN+V +GRRG++
Subjt:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF

Query:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL
         GV+LNMHLHWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N II YRGKNYVQP  E+MSP  TL + KA++K K   +L    ++I +L
Subjt:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL

Query:  EKELEDFQKHLAQFKRKKEDAGVE
        E+EL+  Q   AQ + K++   V+
Subjt:  EKELEDFQKHLAQFKRKKEDAGVE

AT3G25440.2 RNA-binding CRS1 / YhbY (CRM) domain protein3.4e-4044.2Show/hide
Query:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF
        K+ + KL  K+A +  L+ +R K KK+      E +I   L KA++KE  L+E ++K E S+     +DPEILT EE  +  + G K KN+V +GRRG++
Subjt:  KVAKTKL-SKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVF

Query:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL
         GV+LNMHLHWKKH+T++V+ K   P +V E A EL RL+ GIV+D+   N II YRGKNYVQP  E+MSP  TL + KA++K K   +L    ++I +L
Subjt:  GGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQP--EVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKL

Query:  EKELEDFQKHLAQFKRKKEDAGVE
        E+EL+  Q   AQ + K++   V+
Subjt:  EKELEDFQKHLAQFKRKKEDAGVE

AT3G27550.1 RNA-binding CRS1 / YhbY (CRM) domain protein4.7e-3440.57Show/hide
Query:  SVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKN
        S + G   + K  ++ +      L E+R  R K  KKK   + E R+ Y+L++AK+K A L++KL+K+++ +     +DPE+ T E+    K+ G K KN
Subjt:  SVTNGSPPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKN

Query:  FVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEH
        +V +G RGVFGGVV NMH+HWK HETV+V C      ++ E A  + RLS G+V++I     II +RG+NY QP+ + P +TL+K KA+ K ++EQ+LE 
Subjt:  FVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEH

Query:  TSQFIEKLEKEL
            I+K E++L
Subjt:  TSQFIEKLEKEL

AT4G13070.1 RNA-binding CRS1 / YhbY (CRM) domain protein6.3e-10369.09Show/hide
Query:  SRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSFGRPSVTNGS---PPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKA
        ++R+N+  + G F +    R+  N  +EL+TD N+VRF+F   S +  +     K+KK  + KLS+KAK+NELR YRLKAKKK  SPNPEVRIRY LEKA
Subjt:  SRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSFGRPSVTNGS---PPKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKA

Query:  KRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAEELTRLSKGI
        KRKE WLIEKLRK++V K   E YDPE LTEEE+H+LKRTGEK+KNFVL+GRRGVFGGVVLN+HLHWKKHETVKVICKPC KPGQVHEYAEEL RLSKGI
Subjt:  KRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPC-KPGQVHEYAEELTRLSKGI

Query:  VVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKED
        V+D+KPNN I+ YRGKNYV+PEVMSP DTLSKDKA+EKY+YEQSLEHTS+FIEKLEKELE++ K++A+ K+KK++
Subjt:  VVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGAATTCATTGGTCGGATTCATTTCTCTGATTCGAAATGTGTCACGTCGTTCTTTATCGAACATACCCGCATCATTTGGGCAGTCCAAATATGGAAGCTGTGAGCATCA
AAGAAGTAATCATATTGTAACACCTCTTCAGGAATCAACATCCATACACTTCCCACCTGGCTTCCTTTTTTCTAGGAGATATAATGTGCCTGAGTTCCTTGGTGGTTTTA
AAAAATGGCAATCTTTTAGGCATTTTAGAAATGTCGCAGTAGAGCTGAAGACAGACAGCAACATTGTCAGGTTTTCTTTTGGTAGGCCTTCTGTGACTAATGGTTCCCCA
CCGAAACAGAAGAAGGTGGCTAAAACTAAATTGTCTAAAAAGGCCAAATTGAATGAACTCAGACTCTATCGTCTTAAGGCAAAAAAGAAGAAGACATCTCCCAATCCAGA
AGTTAGGATCAGATATTCCCTAGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTTCCAAACCTGTTGTAGAAAAATATGACCCTG
AAATTCTTACTGAGGAAGAGAAGCACTTCTTAAAGCGTACTGGGGAGAAAAAGAAGAATTTTGTTCTGTTGGGGAGACGAGGCGTCTTTGGTGGAGTTGTTCTCAATATG
CATTTGCATTGGAAGAAGCATGAAACTGTCAAAGTTATTTGCAAGCCTTGCAAGCCAGGGCAGGTTCATGAATATGCTGAAGAACTCACTCGATTGAGCAAAGGCATTGT
AGTTGACATTAAACCTAACAATGCCATAATCTTCTACCGGGGAAAGAACTATGTGCAACCAGAAGTAATGTCACCTCCAGATACACTATCAAAAGACAAGGCCATGGAAA
AATATAAGTATGAACAATCACTTGAGCATACAAGTCAGTTCATTGAGAAGTTGGAGAAAGAACTTGAAGACTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAAAAGGAA
GATGCTGGTGTAGAATCCATGGTT
mRNA sequenceShow/hide mRNA sequence
AGGAATTCATTGGTCGGATTCATTTCTCTGATTCGAAATGTGTCACGTCGTTCTTTATCGAACATACCCGCATCATTTGGGCAGTCCAAATATGGAAGCTGTGAGCATCA
AAGAAGTAATCATATTGTAACACCTCTTCAGGAATCAACATCCATACACTTCCCACCTGGCTTCCTTTTTTCTAGGAGATATAATGTGCCTGAGTTCCTTGGTGGTTTTA
AAAAATGGCAATCTTTTAGGCATTTTAGAAATGTCGCAGTAGAGCTGAAGACAGACAGCAACATTGTCAGGTTTTCTTTTGGTAGGCCTTCTGTGACTAATGGTTCCCCA
CCGAAACAGAAGAAGGTGGCTAAAACTAAATTGTCTAAAAAGGCCAAATTGAATGAACTCAGACTCTATCGTCTTAAGGCAAAAAAGAAGAAGACATCTCCCAATCCAGA
AGTTAGGATCAGATATTCCCTAGAAAAGGCCAAAAGGAAAGAAGCGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTTCCAAACCTGTTGTAGAAAAATATGACCCTG
AAATTCTTACTGAGGAAGAGAAGCACTTCTTAAAGCGTACTGGGGAGAAAAAGAAGAATTTTGTTCTGTTGGGGAGACGAGGCGTCTTTGGTGGAGTTGTTCTCAATATG
CATTTGCATTGGAAGAAGCATGAAACTGTCAAAGTTATTTGCAAGCCTTGCAAGCCAGGGCAGGTTCATGAATATGCTGAAGAACTCACTCGATTGAGCAAAGGCATTGT
AGTTGACATTAAACCTAACAATGCCATAATCTTCTACCGGGGAAAGAACTATGTGCAACCAGAAGTAATGTCACCTCCAGATACACTATCAAAAGACAAGGCCATGGAAA
AATATAAGTATGAACAATCACTTGAGCATACAAGTCAGTTCATTGAGAAGTTGGAGAAAGAACTTGAAGACTTTCAGAAGCATCTTGCTCAGTTCAAGAGAAAAAAGGAA
GATGCTGGTGTAGAATCCATGGTT
Protein sequenceShow/hide protein sequence
RNSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFSRRYNVPEFLGGFKKWQSFRHFRNVAVELKTDSNIVRFSFGRPSVTNGSP
PKQKKVAKTKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVVEKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNM
HLHWKKHETVKVICKPCKPGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYEQSLEHTSQFIEKLEKELEDFQKHLAQFKRKKE
DAGVESMV