; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006563 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006563
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold404:1335055..1336180
RNA-Seq ExpressionMS006563
SyntenyMS006563
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016421.1 Chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.2e-13593.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGG SR+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDT+KLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_008441527.1 PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo]3.0e-13694.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLR GSSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022141907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Momordica charantia]2.1e-145100Show/hide
Query:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
Subjt:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022988907.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]1.5e-13593.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFL GG SR+  LLAGARGGVNVV SRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]5.2e-13694.09Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGG SR+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A1S3B4E4 Chlorophyll a-b binding protein, chloroplastic1.5e-13694.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLR GSSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic1.5e-13694.49Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLR GSSR+  LLAGARGGVNVV S KLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1CL59 Chlorophyll a-b binding protein, chloroplastic1.0e-145100Show/hide
Query:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
Subjt:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic7.3e-13693.7Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS ALLNG GSPFL GG SR+  LLAGARGGVNVV SRKLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG+LKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic2.5e-13694.09Show/hide
Query:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI
        ATS A+LNG GSPFLRGG SR+  LLAGARGGVNVVGSRKLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI
Subjt:  ATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI

Query:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
        HGRWAMAAVVGIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG
Subjt:  HGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLG

Query:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FAG++KDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  FAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic3.3e-3236.29Show/hide
Query:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGG--------VNVVGSRKLVI--VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP
        A A+S      F SP  +   S   A  A   GG        +  VGSR + +  VAA   +  W PG         PEWLDGSLPGD+GFDPLGLG DP
Subjt:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGG--------VNVVGSRKLVI--VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDP

Query:  AFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA
          LKW  +AEL+H RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N  
Subjt:  AFLKWYREAELIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA

Query:  NATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE
          T + GYPGG +FDPLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  NATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic2.1e-11981.42Show/hide
Query:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH
        TSAA+LNG  S FL GG+     L A     V    + K   V AA  KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH
Subjt:  TSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIH

Query:  GRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGF
        GRWAMAAV+GIFVGQAWSGIPWFEAGADP AIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDPL  
Subjt:  GRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGF

Query:  AGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        AG+L +GVY+PDTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  AGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic5.6e-11779.69Show/hide
Query:  TATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        T ++ A+LNG  S FL GG  ++ ALL GA     V   ++ V+ AAA  PKKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAE
Subjt:  TATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAV+GIFVGQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        L  AG+L +GVY+PDTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic1.6e-11978.85Show/hide
Query:  ATATSA-ALLNGFGSPFLRGGSSRSHALL---AGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWY
        A ATSA A++NGF SPFL GG   S +LL   +    GV+    + +V+ AAA PKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWY
Subjt:  ATATSA-ALLNGFGSPFLRGGSSRSHALL---AGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWY

Query:  REAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGK
        REAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADP A+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGK
Subjt:  REAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGK

Query:  FFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FFDPL  AG++ +GVY PDT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FFDPLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic2.1e-3136.82Show/hide
Query:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        R H     + GG   +   +LV+V A +   S           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV
Subjt:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG
         GI + +            W++AG+           +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +  
Subjt:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG

Query:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 67.3e-12079.38Show/hide
Query:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
        A A S A+L+G GS FL GG   + AL +G   G   VG + L++  AAAQPKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREA
Subjt:  ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVI-VAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFD
Subjt:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PLG AG  +DGVY PD EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGSLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 61.5e-3236.82Show/hide
Query:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
        R H     + GG   +   +LV+V A +   S           W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW+ +AELIH RWAM AV
Subjt:  RSHALLAGARGGVNVVGSRKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV

Query:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG
         GI + +            W++AG+           +L   Q++LMGW E +RW D   P S  +E   P      +  N   + GYPGG +FD + +  
Subjt:  VGIFVGQAW------SGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAG

Query:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
           + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  SLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 52.0e-3240.52Show/hide
Query:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A
        +R  + +  A GG+N            A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI       
Subjt:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A

Query:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY
         +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A        
Subjt:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY

Query:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.2 photosystem I light harvesting complex gene 52.0e-3240.52Show/hide
Query:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A
        +R  + +  A GG+N            A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI       
Subjt:  SRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--A

Query:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY
         +GI     W+EAGA       F F S   L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A        
Subjt:  WSGI----PWFEAGADPRAIAPFSFGS---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVY

Query:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA
          D +     KL EIK+ R+AM+AML F+ +A
Subjt:  IPDTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT3G61470.1 photosystem I light harvesting complex gene 27.5e-3236.24Show/hide
Query:  GGVNVVGSRKLVIVAAAQPKKS------------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW
        GG  +   +KL + A ++P  S            W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE++H RWAM    GIF+ +  
Subjt:  GGVNVVGSRKLVIVAAAQPKKS------------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAW

Query:  SGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIP
        + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPGG +FDPLG+           
Subjt:  SGI------PWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIP

Query:  DTEKLERLKLAEIKHARIAMLAMLIFYFE
           KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  DTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAACTGCAACTTCTGCTGCTCTGCTTAATGGCTTTGGCTCCCCCTTCCTCCGTGGGGGCAGTAGCAGAAGCCACGCCCTGCTCGCTGGAGCCAGAGGTGGTGTCAATGT
CGTCGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGCTCCCCGGCGTTAGGGGCGGCGGCAACTTGGTCGACCCCGAATGGCTCGATGGCT
CGCTCCCAGGCGACTACGGGTTCGACCCACTGGGCTTGGGGAAGGACCCAGCATTCCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGCCGGTGGGCAATGGCGGCT
GTGGTCGGAATCTTCGTGGGGCAGGCTTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCGGATCCGAGGGCAATTGCTCCCTTCTCCTTCGGATCTCTGCTGGGAACACA
GCTGCTGCTGATGGGATGGGTGGAAAGCAAGCGGTGGGTGGATTTCTTCAACCCTGAGTCACAATCGGTGGAGTGGGCGACGCCTTGGTCGAGGACGGCGGAGAATTTCG
CGAACGCGACGGGAGAACAGGGGTACCCCGGCGGGAAATTCTTCGATCCGTTGGGATTTGCCGGAAGTTTGAAGGACGGAGTTTACATTCCGGACACGGAGAAGCTGGAG
AGATTGAAGTTGGCGGAGATCAAGCACGCTCGGATCGCCATGTTGGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGCTGGGTGCTCTTGGATTG
mRNA sequenceShow/hide mRNA sequence
GCAACTGCAACTTCTGCTGCTCTGCTTAATGGCTTTGGCTCCCCCTTCCTCCGTGGGGGCAGTAGCAGAAGCCACGCCCTGCTCGCTGGAGCCAGAGGTGGTGTCAATGT
CGTCGGCTCTCGCAAGCTCGTCATCGTCGCCGCTGCTCAGCCCAAGAAGTCTTGGCTCCCCGGCGTTAGGGGCGGCGGCAACTTGGTCGACCCCGAATGGCTCGATGGCT
CGCTCCCAGGCGACTACGGGTTCGACCCACTGGGCTTGGGGAAGGACCCAGCATTCCTGAAGTGGTACAGAGAGGCAGAGCTAATCCACGGCCGGTGGGCAATGGCGGCT
GTGGTCGGAATCTTCGTGGGGCAGGCTTGGAGTGGGATCCCATGGTTCGAAGCCGGAGCGGATCCGAGGGCAATTGCTCCCTTCTCCTTCGGATCTCTGCTGGGAACACA
GCTGCTGCTGATGGGATGGGTGGAAAGCAAGCGGTGGGTGGATTTCTTCAACCCTGAGTCACAATCGGTGGAGTGGGCGACGCCTTGGTCGAGGACGGCGGAGAATTTCG
CGAACGCGACGGGAGAACAGGGGTACCCCGGCGGGAAATTCTTCGATCCGTTGGGATTTGCCGGAAGTTTGAAGGACGGAGTTTACATTCCGGACACGGAGAAGCTGGAG
AGATTGAAGTTGGCGGAGATCAAGCACGCTCGGATCGCCATGTTGGCGATGCTCATCTTCTACTTCGAAGCTGGACAGGGGAAGACGCCGCTGGGTGCTCTTGGATTG
Protein sequenceShow/hide protein sequence
ATATSAALLNGFGSPFLRGGSSRSHALLAGARGGVNVVGSRKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAA
VVGIFVGQAWSGIPWFEAGADPRAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGSLKDGVYIPDTEKLE
RLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL