; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006566 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006566
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchaperone protein dnaJ 20, chloroplastic-like
Genome locationscaffold404:1363805..1364287
RNA-Seq ExpressionMS006566
SyntenyMS006566
Gene Ontology termsGO:0061077 - chaperone-mediated protein folding (biological process)
GO:0009507 - chloroplast (cellular component)
InterPro domainsIPR001623 - DnaJ domain
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455532.1 PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo]9.5e-3555.56Show/hide
Query:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN
        MF SP++ +   P  + P   + SR          V+  AAA+    D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LN
Subjt:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN

Query:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN
        AAYKTLSDPVLRR+YDDS+MG  +    + F+GD  +VWQ QI+EL+RRS+ LR+DRS   SW ARM+A++
Subjt:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN

XP_022141929.1 chaperone protein dnaJ 20, chloroplastic-like [Momordica charantia]8.5e-7699.31Show/hide
Query:  MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES
        MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES
Subjt:  MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES

Query:  FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRARNC
        FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRA+NC
Subjt:  FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRARNC

XP_022963776.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]3.5e-3766.67Show/hide
Query:  PLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SFPR
        P  P   ++  AA T   DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSDPVLRR+YDDS+MGL    S+ R
Subjt:  PLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SFPR

Query:  GRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN
        G  FE D++VWQ QI+EL+RRSA  +RDRS SWG RMRARN
Subjt:  GRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN

XP_022967659.1 chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]4.5e-3765.73Show/hide
Query:  TRPLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SF
        + P  P   ++  AA T   DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSDPVLRR+YDDS+MGL    S+
Subjt:  TRPLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SF

Query:  PRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN
         R R FE D++VWQ QI+EL+RRSA  +RDRS SWG RMRARN
Subjt:  PRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN

XP_038888723.1 dnaJ homolog subfamily A member 3, mitochondrial-like [Benincasa hispida]5.0e-3655.93Show/hide
Query:  MFVSPSNTAPFCSIPLGMKGSRQTRPLPPPPAVA-----------FPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIF
        MF SP+++    S  L +    +T    PP A+A             A    DYYKLLSVSGG  AS+EEIK+AYRAMALQYHPD+  DP +KEQ TRIF
Subjt:  MFVSPSNTAPFCSIPLGMKGSRQTRPLPPPPAVA-----------FPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIF

Query:  VRLNAAYKTLSDPVLRREYDDSVMGLES--FPRG-RSFEGDKSVWQWQIIELQRRSADLRRDRS---SWGARMRARN
        V+LNAAYKTLSDPVLRR+YD S+MG  +  F  G R F+ D +VWQ Q++EL+RRSA LRRDRS   SWGA M+AR+
Subjt:  VRLNAAYKTLSDPVLRREYDDSVMGLES--FPRG-RSFEGDKSVWQWQIIELQRRSADLRRDRS---SWGARMRARN

TrEMBL top hitse value%identityAlignment
A0A1S3C0P6 chaperone protein dnaJ 20, chloroplastic-like4.6e-3555.56Show/hide
Query:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN
        MF SP++ +   P  + P   + SR          V+  AAA+    D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LN
Subjt:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN

Query:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN
        AAYKTLSDPVLRR+YDDS+MG  +    + F+GD  +VWQ QI+EL+RRS+ LR+DRS   SW ARM+A++
Subjt:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN

A0A5A7SN90 Chaperone protein dnaJ 204.6e-3555.56Show/hide
Query:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN
        MF SP++ +   P  + P   + SR          V+  AAA+    D+YYKLLSVSGG  AS EEIK+AYRAMAL+YHPD+  DPS+KEQ TR+FV+LN
Subjt:  MFVSPSNTA---PFCSIPLGMKGSRQTRPLPPPPAVAFPAAAT----DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLN

Query:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN
        AAYKTLSDPVLRR+YDDS+MG  +    + F+GD  +VWQ QI+EL+RRS+ LR+DRS   SW ARM+A++
Subjt:  AAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDK-SVWQWQIIELQRRSADLRRDRS---SWGARMRARN

A0A6J1CK55 chaperone protein dnaJ 20, chloroplastic-like4.1e-7699.31Show/hide
Query:  MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES
        MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES
Subjt:  MKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLES

Query:  FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRARNC
        FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRA+NC
Subjt:  FPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRARNC

A0A6J1HH09 chaperone protein dnaJ 20, chloroplastic-like1.7e-3766.67Show/hide
Query:  PLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SFPR
        P  P   ++  AA T   DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSDPVLRR+YDDS+MGL    S+ R
Subjt:  PLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SFPR

Query:  GRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN
        G  FE D++VWQ QI+EL+RRSA  +RDRS SWG RMRARN
Subjt:  GRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN

A0A6J1HXC8 chaperone protein dnaJ 20, chloroplastic-like2.2e-3765.73Show/hide
Query:  TRPLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SF
        + P  P   ++  AA T   DYYKLLSVS G  AS EEIKRAYRAMALQYHPD+  DP +KEQ T++FV+LNAAYKTLSDPVLRR+YDDS+MGL    S+
Subjt:  TRPLPPPPAVAFPAAAT--DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLE---SF

Query:  PRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN
         R R FE D++VWQ QI+EL+RRSA  +RDRS SWG RMRARN
Subjt:  PRGRSFEGDKSVWQWQIIELQRRSADLRRDRS-SWGARMRARN

SwissProt top hitse value%identityAlignment
Q2NL21 DnaJ homolog subfamily C member 118.1e-1339.81Show/hide
Query:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR
        +DYY LL+V     AS EE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LSDP  R  YD  + G     RG   EG      W+++E +R
Subjt:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR

Query:  RSADLRRD
          A++R +
Subjt:  RSADLRRD

Q5RC70 DnaJ homolog subfamily C member 112.1e-1340.74Show/hide
Query:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR
        +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LSDP  R  YD  + G     RG   EG      W+++E +R
Subjt:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR

Query:  RSADLRRD
          A++R +
Subjt:  RSADLRRD

Q5U458 DnaJ homolog subfamily C member 112.1e-1340.74Show/hide
Query:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR
        +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LSDP  R  YD  + G     RG   EG      W+++E +R
Subjt:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR

Query:  RSADLRRD
          A++R +
Subjt:  RSADLRRD

Q9NVH1 DnaJ homolog subfamily C member 112.1e-1340.74Show/hide
Query:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR
        +DYY LL+V     ASSEE+K AYR + + YHPD   DP +K Q  R+F  ++ AY+ LSDP  R  YD  + G     RG   EG      W+++E +R
Subjt:  DDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSVWQWQIIELQR

Query:  RSADLRRD
          A++R +
Subjt:  RSADLRRD

Q9SDN0 Chaperone protein dnaJ 20, chloroplastic1.8e-1238.97Show/hide
Query:  PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV-
        P   ++D  +Y LL V+     +  EIK+AY+ +A +YHPDV   P   E++T  F+R+  AY+TLSDP  R  YD D  MG   SF   R    D+ V 
Subjt:  PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV-

Query:  ---------WQWQIIELQRRSADLRRDRSSWGARMR
                 WQ Q+  L+RRS     +  SW ARMR
Subjt:  ---------WQWQIIELQRRSADLRRDRSSWGARMR

Arabidopsis top hitse value%identityAlignment
AT1G80030.1 Molecular chaperone Hsp40/DnaJ family protein1.9e-0947.22Show/hide
Query:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD
        A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+ LSD   R  YD
Subjt:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD

AT1G80030.2 Molecular chaperone Hsp40/DnaJ family protein1.9e-0947.22Show/hide
Query:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD
        A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+ LSD   R  YD
Subjt:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD

AT1G80030.3 Molecular chaperone Hsp40/DnaJ family protein1.9e-0947.22Show/hide
Query:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD
        A + DYY  L VS    A+++EIK AYR +A QYHPDV  +P   E+F  I    +AAY+ LSD   R  YD
Subjt:  AATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD

AT4G13830.2 DNAJ-like 201.3e-1338.97Show/hide
Query:  PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV-
        P   ++D  +Y LL V+     +  EIK+AY+ +A +YHPDV   P   E++T  F+R+  AY+TLSDP  R  YD D  MG   SF   R    D+ V 
Subjt:  PAAATDD--YYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYD-DSVMGLE-SFPRGRSFEGDKSV-

Query:  ---------WQWQIIELQRRSADLRRDRSSWGARMR
                 WQ Q+  L+RRS     +  SW ARMR
Subjt:  ---------WQWQIIELQRRSADLRRDRSSWGARMR

AT5G23240.1 DNAJ heat shock N-terminal domain-containing protein2.5e-0938.61Show/hide
Query:  AVAFPAAATD-DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSV
        A +  ++ TD D Y LL +   S  S  +IK AYRA+  + HPD+ GDP        + + LN AY+ LSDP+ R+ YD     LE   RG + +   SV
Subjt:  AVAFPAAATD-DYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDDSVMGLESFPRGRSFEGDKSV

Query:  W
        W
Subjt:  W


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTTCTCCAAGTAACACTGCCCCATTTTGCTCTATTCCTCTAGGGATGAAGGGCAGCCGCCAAACGAGGCCGCTGCCGCCACCCCCTGCAGTGGCGTTCCCTGC
GGCGGCCACCGATGACTACTACAAGTTGCTTTCGGTGAGCGGCGGGAGCGGCGCGAGTAGTGAGGAGATAAAGAGGGCTTATAGGGCCATGGCCTTGCAGTATCATCCCG
ACGTTTGCGGTGACCCCTCCATGAAGGAGCAGTTCACCAGGATTTTTGTTCGGCTCAATGCTGCTTACAAGACGCTCTCAGACCCGGTTCTGAGACGAGAGTACGACGAC
TCCGTGATGGGGCTGGAGAGTTTCCCGCGTGGAAGGAGCTTTGAGGGAGACAAAAGCGTGTGGCAGTGGCAGATTATTGAGCTCCAACGGCGGTCCGCTGATCTCCGGAG
GGATCGGTCCTCGTGGGGTGCTCGAATGCGGGCGCGAAACTGT
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTTCTCCAAGTAACACTGCCCCATTTTGCTCTATTCCTCTAGGGATGAAGGGCAGCCGCCAAACGAGGCCGCTGCCGCCACCCCCTGCAGTGGCGTTCCCTGC
GGCGGCCACCGATGACTACTACAAGTTGCTTTCGGTGAGCGGCGGGAGCGGCGCGAGTAGTGAGGAGATAAAGAGGGCTTATAGGGCCATGGCCTTGCAGTATCATCCCG
ACGTTTGCGGTGACCCCTCCATGAAGGAGCAGTTCACCAGGATTTTTGTTCGGCTCAATGCTGCTTACAAGACGCTCTCAGACCCGGTTCTGAGACGAGAGTACGACGAC
TCCGTGATGGGGCTGGAGAGTTTCCCGCGTGGAAGGAGCTTTGAGGGAGACAAAAGCGTGTGGCAGTGGCAGATTATTGAGCTCCAACGGCGGTCCGCTGATCTCCGGAG
GGATCGGTCCTCGTGGGGTGCTCGAATGCGGGCGCGAAACTGT
Protein sequenceShow/hide protein sequence
MFVSPSNTAPFCSIPLGMKGSRQTRPLPPPPAVAFPAAATDDYYKLLSVSGGSGASSEEIKRAYRAMALQYHPDVCGDPSMKEQFTRIFVRLNAAYKTLSDPVLRREYDD
SVMGLESFPRGRSFEGDKSVWQWQIIELQRRSADLRRDRSSWGARMRARNC