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MS006567 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006567
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF642
Genome locationscaffold404:1365155..1365301
RNA-Seq ExpressionMS006567
SyntenyMS006567
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064956.1 DUF642 [Cucumis melo var. makuwa]1.3e-0875.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

XP_004138737.1 uncharacterized protein LOC101219952 [Cucumis sativus]1.3e-0875.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

XP_008445161.2 PREDICTED: uncharacterized protein LOC103488281 [Cucumis melo]1.3e-0875.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

XP_022962356.1 uncharacterized protein LOC111462826 [Cucurbita moschata]4.6e-0977.55Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKFQAESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

XP_023547174.1 uncharacterized protein LOC111806058 [Cucurbita pepo subsp. pepo]4.6e-0977.55Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKFQAESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

TrEMBL top hitse value%identityAlignment
A0A0A0LPH6 Uncharacterized protein6.5e-0975.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

A0A1S3BBJ9 uncharacterized protein LOC1034882816.5e-0975.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

A0A5A7VF52 DUF6426.5e-0975.51Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKF+AESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

A0A6J1HCW4 uncharacterized protein LOC1114628262.2e-0977.55Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKFQAESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

A0A6J1KCD7 uncharacterized protein LOC1114920112.2e-0977.55Show/hide
Query:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        S EGSMV EAF GKN  KVPYQSKGN GSK   LKFQAESTRT IMF S
Subjt:  SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G32460.1 Protein of unknown function, DUF6424.6e-0756.52Show/hide
Query:  GSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        GSM+ EAF GK+  KVPY+SKG  G K  +L+F A S+RT +MF S
Subjt:  GSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

AT4G32460.2 Protein of unknown function, DUF6424.6e-0756.52Show/hide
Query:  GSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        GSM+ EAF GK+  KVPY+SKG  G K  +L+F A S+RT +MF S
Subjt:  GSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

AT5G11420.1 Protein of unknown function, DUF6429.3e-0857.45Show/hide
Query:  EGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        +GSMV EAF GK+  KVPY+S+G  G K  +L+F A STRT +MF S
Subjt:  EGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS

AT5G25460.1 Protein of unknown function, DUF6422.1e-0757.45Show/hide
Query:  EGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS
        +GSMV EAF GK+  KVPY+SKG  G K  +++F A STR+ IMF S
Subjt:  EGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGTACGAGGGATCCATGGTGGGTGAAGCCTTCGACGGCAAGAACCCTCCCAAAGTCCCGTACCAGTCAAAGGGTAACGACGGATCGAAGTCGGTGACCCTGAAATTCCA
AGCGGAGTCCACAAGGACGTGCATCATGTTTGCAAGC
mRNA sequenceShow/hide mRNA sequence
TCGTACGAGGGATCCATGGTGGGTGAAGCCTTCGACGGCAAGAACCCTCCCAAAGTCCCGTACCAGTCAAAGGGTAACGACGGATCGAAGTCGGTGACCCTGAAATTCCA
AGCGGAGTCCACAAGGACGTGCATCATGTTTGCAAGC
Protein sequenceShow/hide protein sequence
SYEGSMVGEAFDGKNPPKVPYQSKGNDGSKSVTLKFQAESTRTCIMFAS