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MS006569 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006569
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold404:1367452..1367766
RNA-Seq ExpressionMS006569
SyntenyMS006569
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]7.1e-1540.82Show/hide
Query:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQT
        +FI FGG W D+   YVGG  +G+ V  T TY+E    ++RL  ++   +D++IR  YH       M +TDDDDL F L  E VS++P+++ST P+++
Subjt:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQT

XP_022155431.1 uncharacterized protein LOC111022579 isoform X1 [Momordica charantia]1.6e-1440.4Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK
        R+F+ +GG WND + +Y GG  +G+ V    TY++ L  +Y L+  +P + D+ I+ IY  K +      EI++D DLNF+L GED SE+P+Y+S  P+
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK

XP_022155432.1 uncharacterized protein LOC111022579 isoform X2 [Momordica charantia]1.6e-1440.4Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK
        R+F+ +GG WND + +Y GG  +G+ V    TY++ L  +Y L+  +P + D+ I+ IY  K +      EI++D DLNF+L GED SE+P+Y+S  P+
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK

XP_038880853.1 uncharacterized protein LOC120072537 [Benincasa hispida]1.1e-1236.36Show/hide
Query:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQTH
        + + FGG+W++S ++YVGG  +GL V +  T  E +  +++  N +P  FDI I+   +       + I DD+DLNFFL G + S +P+++S TP ++H
Subjt:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQTH

XP_038893574.1 uncharacterized protein LOC120082123 [Benincasa hispida]2.7e-1437Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQTH
        R+F+ FGG+W++S ++YVGG  +GL + +  T  E +  +++  NI    FDI I+  Y        ++I DD+DL+FFL G + S++P+++S TP  +H
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQTH

TrEMBL top hitse value%identityAlignment
A0A5A7T2N3 MuDRA-like transposase3.0e-1134.69Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFK--TKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTP
        R+ +  GGEW++ ++ Y GG  +G+ V    T+++    +Y L+ ++P +FDI IR IY  K   +    E+++D DL F++  E++ E+P+YLS  P
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFK--TKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTP

A0A6J1DL08 uncharacterized protein LOC1110220713.4e-1540.82Show/hide
Query:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQT
        +FI FGG W D+   YVGG  +G+ V  T TY+E    ++RL  ++   +D++IR  YH       M +TDDDDL F L  E VS++P+++ST P+++
Subjt:  VFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQT

A0A6J1DPC2 uncharacterized protein LOC111022579 isoform X27.7e-1540.4Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK
        R+F+ +GG WND + +Y GG  +G+ V    TY++ L  +Y L+  +P + D+ I+ IY  K +      EI++D DLNF+L GED SE+P+Y+S  P+
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK

A0A6J1DRN0 uncharacterized protein LOC111022579 isoform X17.7e-1540.4Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK
        R+F+ +GG WND + +Y GG  +G+ V    TY++ L  +Y L+  +P + D+ I+ IY  K +      EI++D DLNF+L GED SE+P+Y+S  P+
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTK--VCVMEITDDDDLNFFLTGEDVSELPIYLSTTPK

A0A6J1DUS4 uncharacterized protein LOC1110236677.9e-1237.86Show/hide
Query:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVME--ITDDDDLNFFLTG-EDVSELPIYLSTTPK
        R+F+ +GG+WN++   Y GG   GL VD T TY   +  ++ L+ I+P QFD+I++ +Y F  +  V    I DD  L F+L G  D S++P+Y++  PK
Subjt:  RVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVME--ITDDDDLNFFLTG-EDVSELPIYLSTTPK

Query:  QTH
         ++
Subjt:  QTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTCGTGTTTTCATAACATTTGGTGGAGAATGGAACGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAGTGGATAGTACAACCACGTACAGAGAATT
TCTAGGTCACGTGTATAGATTGAGTAATATAAACCCCCTTCAATTCGATATTATAATTAGACGCATATATCATTTTAAAACTAAAGTTTGTGTAATGGAGATAACTGATG
ACGATGACCTGAATTTTTTTTTAACTGGTGAGGATGTATCTGAATTGCCTATATACCTATCTACTACGCCAAAGCAGACACATGAGAATGAAACG
mRNA sequenceShow/hide mRNA sequence
CCTCGTGTTTTCATAACATTTGGTGGAGAATGGAACGATAGTGAAAAAGATTACGTTGGTGGTCGCACGAGAGGATTGACAGTGGATAGTACAACCACGTACAGAGAATT
TCTAGGTCACGTGTATAGATTGAGTAATATAAACCCCCTTCAATTCGATATTATAATTAGACGCATATATCATTTTAAAACTAAAGTTTGTGTAATGGAGATAACTGATG
ACGATGACCTGAATTTTTTTTTAACTGGTGAGGATGTATCTGAATTGCCTATATACCTATCTACTACGCCAAAGCAGACACATGAGAATGAAACG
Protein sequenceShow/hide protein sequence
PRVFITFGGEWNDSEKDYVGGRTRGLTVDSTTTYREFLGHVYRLSNINPLQFDIIIRRIYHFKTKVCVMEITDDDDLNFFLTGEDVSELPIYLSTTPKQTHENET