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MS006570 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006570
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionActin-related protein 3
Genome locationscaffold404:1378272..1378397
RNA-Seq ExpressionMS006570
SyntenyMS006570
Gene Ontology termsGO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR043129 - ATPase, nucleotide binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2090771.1 hypothetical protein ES319_A03G143800v1 [Gossypium barbadense]1.4e-0669.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
MBA0730331.1 hypothetical protein [Gossypium laxum]1.4e-0669.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
PPD94368.1 hypothetical protein GOBAR_DD08615 [Gossypium barbadense]1.4e-0669.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
XP_012479281.1 PREDICTED: actin-related protein 3 [Gossypium raimondii]1.4e-0669.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
XP_012845533.1 PREDICTED: actin-related protein 3 [Erythranthe guttata]1.1e-0669.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ D+KKI+++R+LASETRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
TrEMBL top hitse value%identityAlignment
A0A022QPI3 Uncharacterized protein5.2e-0769.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ D+KKI+++R+LASETRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
A0A0B0NNK2 Actin-related 3-like protein6.8e-0769.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
A0A5D2LZC4 Uncharacterized protein6.8e-0769.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
A0A5D2R7Z4 Uncharacterized protein6.8e-0769.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS+TRLGG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
A0A6J1DCX6 uncharacterized protein LOC1110198766.8e-0793.94Show/hide
Query:  MFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        MFKDFKRRLRSDLKKIM+ RILASETRLGGKAK
Subjt:  MFKDFKRRLRSDLKKIMESRILASETRLGGKAK
SwissProt top hitse value%identityAlignment
A2X6S3 Actin-related protein 37.0e-0969.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS  RLGG AK
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
P78712 Actin-related protein 31.2e-0556.41Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGG
        N +L GGST++KDF RRL+ D+K+++++RI ASE R GG
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGG
Q6K908 Actin-related protein 37.0e-0969.05Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LAS  RLGG AK
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
Q9P1U1 Actin-related protein 3B2.1e-0552.38Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
        N +L GGSTMF+DF RRL+ DLK+++++R+  SE   GG+ K
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK
Q9SAF1 Actin-related protein 33.9e-0762.5Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LA+  R GG+
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGK
Arabidopsis top hitse value%identityAlignment
AT1G13180.1 Actin-like ATPase superfamily protein2.7e-0862.5Show/hide
Query:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGK
        N +L GGSTMFKDF RRL+ DLKKI+++R+LA+  R GG+
Subjt:  NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATACATTACTATTTGGAGGTTCAACAATGTTCAAAGACTTCAAGAGAAGGTTACGTAGCGACTTGAAGAAGATTATGGAAAGTCGAATCCTTGCTTCTGAAACTAGACT
AGGAGGGAAAGCAAAG
mRNA sequenceShow/hide mRNA sequence
AATACATTACTATTTGGAGGTTCAACAATGTTCAAAGACTTCAAGAGAAGGTTACGTAGCGACTTGAAGAAGATTATGGAAAGTCGAATCCTTGCTTCTGAAACTAGACT
AGGAGGGAAAGCAAAG
Protein sequenceShow/hide protein sequence
NTLLFGGSTMFKDFKRRLRSDLKKIMESRILASETRLGGKAK