; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006579 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006579
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger and BTB domain-containing protein 47
Genome locationscaffold404:1544762..1544974
RNA-Seq ExpressionMS006579
SyntenyMS006579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065239.1 zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]8.5e-0446.81Show/hide
Query:  KKKIQKTKEIAVAIAKSSTS--------------------HGCDEAQNEEKNEELSP-----SEVAKIPPEKKVKTTEDEQPPPPTVEGGEKQE
        KKK QKTKEIAVAIA++STS                       DE QNE++N++L P      EV + PPEKK+K T DE PPP +V+ G KQE
Subjt:  KKKIQKTKEIAVAIAKSSTS--------------------HGCDEAQNEEKNEELSP-----SEVAKIPPEKKVKTTEDEQPPPPTVEGGEKQE
TrEMBL top hitse value%identityAlignment
A0A5A7VIE6 Zinc finger and BTB domain-containing protein 474.1e-0446.81Show/hide
Query:  KKKIQKTKEIAVAIAKSSTS--------------------HGCDEAQNEEKNEELSP-----SEVAKIPPEKKVKTTEDEQPPPPTVEGGEKQE
        KKK QKTKEIAVAIA++STS                       DE QNE++N++L P      EV + PPEKK+K T DE PPP +V+ G KQE
Subjt:  KKKIQKTKEIAVAIAKSSTS--------------------HGCDEAQNEEKNEELSP-----SEVAKIPPEKKVKTTEDEQPPPPTVEGGEKQE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTCGAAAGAAGAAGATCCAGAAGACGAAGGAGATTGCAGTGGCAATAGCAAAATCCTCGACCTCGCATGGTTGTGATGAAGCACAAAACGAAGAGAAGAACGAGGAACT
TTCGCCGTCGGAAGTTGCAAAAATACCGCCGGAGAAGAAGGTTAAAACCACCGAAGATGAGCAACCGCCGCCGCCCACTGTGGAAGGAGGTGAAAAACAAGAA
mRNA sequenceShow/hide mRNA sequence
TCTCGAAAGAAGAAGATCCAGAAGACGAAGGAGATTGCAGTGGCAATAGCAAAATCCTCGACCTCGCATGGTTGTGATGAAGCACAAAACGAAGAGAAGAACGAGGAACT
TTCGCCGTCGGAAGTTGCAAAAATACCGCCGGAGAAGAAGGTTAAAACCACCGAAGATGAGCAACCGCCGCCGCCCACTGTGGAAGGAGGTGAAAAACAAGAA
Protein sequenceShow/hide protein sequence
SRKKKIQKTKEIAVAIAKSSTSHGCDEAQNEEKNEELSPSEVAKIPPEKKVKTTEDEQPPPPTVEGGEKQE