; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006585 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006585
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRubredoxin
Genome locationscaffold2140:43770..44357
RNA-Seq ExpressionMS006585
SyntenyMS006585
Gene Ontology termsGO:0010207 - photosystem II assembly (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0043448 - alkane catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR018527 - Rubredoxin, iron-binding site
IPR024934 - Rubredoxin-like domain
IPR024935 - Rubredoxin domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33910.1 rubredoxin [Cucumis melo subsp. melo]9.9e-8783.66Show/hide
Query:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA
        MA Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +A RP S+F LNSIDVSKEDKPTSD+PN P+       E+  EKFD RRLEE+FA
Subjt:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA

Query:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF
        VLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYF
Subjt:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF

Query:  LQ
        LQ
Subjt:  LQ

XP_004139218.2 uncharacterized protein LOC101219075 [Cucumis sativus]1.4e-8584.24Show/hide
Query:  MAAYASARP-TLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP-------AEEAAEKFDPRRLEEKF
        MA Y+SARP TLSFHLSQPSLPIPR NFKPP  A   AAI PL RS+A RP S+F LNSIDVSKEDKPTSD+PN P        EE  EKFD RRLEEKF
Subjt:  MAAYASARP-TLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP-------AEEAAEKFDPRRLEEKF

Query:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY
        AVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLSGY
Subjt:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY

Query:  FLQ
        FLQ
Subjt:  FLQ

XP_016901839.1 PREDICTED: uncharacterized protein LOC103499548 [Cucumis melo]3.4e-8783.74Show/hide
Query:  SMAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKF
        SMA Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +A RP S+F LNSIDVSKEDKPTSD+PN P+       E+  EKFD RRLEE+F
Subjt:  SMAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKF

Query:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY
        AVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGY
Subjt:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY

Query:  FLQ
        FLQ
Subjt:  FLQ

XP_022946609.1 uncharacterized protein LOC111450624 [Cucurbita moschata]1.9e-8283Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA---EEAA---EKFDPRRLEEKFAVL
        AAYASARPTLSFHLSQPS+P PR NFKPP       A  PLQRSAA RP  +F LNSIDVSKEDKPTSD+P+  A   EEAA   EK D RR+EEKFAVL
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA---EEAA---EKFDPRRLEEKFAVL

Query:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ
        NTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYG+L FFFALFLSGYFLQ
Subjt:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ

XP_038891199.1 rubredoxin [Benincasa hispida]1.1e-8884.88Show/hide
Query:  MAAYASARPTLSFHLSQPSLPIPRLNFKPP----TAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP------AEEAAEKFDPRRLEE
        MAAY+SARPTLSFHLSQPSLPIPR NFKPP     AAAT  A+ PLQRSAA RP+S+F LNSIDVSKEDKPTSD+PN P      A +  EKFD RRLEE
Subjt:  MAAYASARPTLSFHLSQPSLPIPRLNFKPP----TAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP------AEEAAEKFDPRRLEE

Query:  KFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLS
        KFAVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLS
Subjt:  KFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLS

Query:  GYFLQ
        GYFLQ
Subjt:  GYFLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LJE4 Rubredoxin-like domain-containing protein6.9e-8684.24Show/hide
Query:  MAAYASARP-TLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP-------AEEAAEKFDPRRLEEKF
        MA Y+SARP TLSFHLSQPSLPIPR NFKPP  A   AAI PL RS+A RP S+F LNSIDVSKEDKPTSD+PN P        EE  EKFD RRLEEKF
Subjt:  MAAYASARP-TLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPP-------AEEAAEKFDPRRLEEKF

Query:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY
        AVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSL FFFALFLSGY
Subjt:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY

Query:  FLQ
        FLQ
Subjt:  FLQ

A0A1S4E0U3 uncharacterized protein LOC1034995481.7e-8783.74Show/hide
Query:  SMAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKF
        SMA Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +A RP S+F LNSIDVSKEDKPTSD+PN P+       E+  EKFD RRLEE+F
Subjt:  SMAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKF

Query:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY
        AVLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGY
Subjt:  AVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGY

Query:  FLQ
        FLQ
Subjt:  FLQ

A0A5A7VDM5 Rubredoxin4.8e-8783.66Show/hide
Query:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA
        MA Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +A RP S+F LNSIDVSKEDKPTSD+PN P+       E+  EKFD RRLEE+FA
Subjt:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA

Query:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF
        VLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYF
Subjt:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF

Query:  LQ
        LQ
Subjt:  LQ

A0A6J1G4B1 uncharacterized protein LOC1114506249.4e-8383Show/hide
Query:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA---EEAA---EKFDPRRLEEKFAVL
        AAYASARPTLSFHLSQPS+P PR NFKPP       A  PLQRSAA RP  +F LNSIDVSKEDKPTSD+P+  A   EEAA   EK D RR+EEKFAVL
Subjt:  AAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA---EEAA---EKFDPRRLEEKFAVL

Query:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ
        NTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYG+L FFFALFLSGYFLQ
Subjt:  NTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ

E5GBR8 Rubredoxin4.8e-8783.66Show/hide
Query:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA
        MA Y+SARPTLSFHLSQPSLPIPR NFKPP AA  P    PLQR +A RP S+F LNSIDVSKEDKPTSD+PN P+       E+  EKFD RRLEE+FA
Subjt:  MAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPA-------EEAAEKFDPRRLEEKFA

Query:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF
        VLNTGIYECRSCGHKFDEAVGDP+YPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGN LTSGQKAVLIYGSLLFFFALFLSGYF
Subjt:  VLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYF

Query:  LQ
        LQ
Subjt:  LQ

SwissProt top hitse value%identityAlignment
P00270 Rubredoxin7.1e-1154Show/hide
Query:  IYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK
        IY C  CG+++D A GDP   I PG  FE LP+DW CP CGA+K  FE +
Subjt:  IYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESK

P73068 Rubredoxin9.2e-1943.4Show/hide
Query:  EEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIA--GFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFA
        E+  A L +  +ECR+CG+ +  + GD    ++PG PFE LP +W+CP CGA +++F S     A  GFA+N  YG G N ++ G+K +LI+GSL   F 
Subjt:  EEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIA--GFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFA

Query:  LFLSGY
         FLS Y
Subjt:  LFLSGY

Q9FDN6 High molecular weight rubredoxin9.2e-1146.38Show/hide
Query:  EAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFE
        + A  F   R ++K A L +  Y+C  C + +D   GDP + IAPG PF  LPEDW CP CGA K  FE
Subjt:  EAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFE

Q9WWN1 Rubredoxin1.3e-1745.79Show/hide
Query:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF
        AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   +   +GF +N  YGLG N LT  QK +LI+G+L   F  F
Subjt:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF

Query:  LSGYFLQ
        +S Y LQ
Subjt:  LSGYFLQ

Q9XBL8 Rubredoxin7.8e-1845.79Show/hide
Query:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF
        AV NT +  +ECRSCG+ ++   GD  + IAP  PF +LP +WRCP C A K+ F +   +   +GF +N  YGLG N LT  QK +LI+G+L   F  F
Subjt:  AVLNTGI--YECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFES--KSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALF

Query:  LSGYFLQ
        +S Y LQ
Subjt:  LSGYFLQ

Arabidopsis top hitse value%identityAlignment
AT1G54500.1 Rubredoxin-like superfamily protein8.5e-5271.43Show/hide
Query:  VSKEDKPT----SDE-PNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGF
        VS++D  T    SD+      +E  +  + RR+EEKFAVLNTGIYECRSCG+K+DE+ GDPSYPI PG  F++LPEDWRCPTCGAA+SFFESK VEIAGF
Subjt:  VSKEDKPT----SDE-PNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKFDEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGF

Query:  AQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ
        AQNQQYGLGGNALTSGQK  LI+GSLL FFALFLSGYF+Q
Subjt:  AQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATGGCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCC
CGCCGCCATCGCGCCATTGCAGAGATCAGCGGCGGTGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACCTCCGACGAGCCAA
ATCCGCCGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCTTGTGGGCATAAATTC
GACGAGGCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGA
GAGTAAGAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTACGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGT
TCTTCTTTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA
mRNA sequenceShow/hide mRNA sequence
TCCATGGCGGCTTATGCCTCTGCAAGACCCACTCTCTCCTTCCACCTCTCCCAACCTTCCCTTCCAATCCCCAGGCTCAACTTCAAACCCCCCACCGCCGCCGCCACCCC
CGCCGCCATCGCGCCATTGCAGAGATCAGCGGCGGTGAGGCCCAGCTCCCTCTTCGCCCTCAACTCCATTGACGTCTCTAAAGAAGACAAGCCCACCTCCGACGAGCCAA
ATCCGCCGGCGGAAGAGGCGGCGGAGAAGTTCGACCCGCGGCGGCTGGAGGAGAAATTTGCAGTGCTGAACACAGGGATTTATGAGTGCAGGTCTTGTGGGCATAAATTC
GACGAGGCGGTCGGAGACCCGTCGTATCCGATAGCGCCGGGGCTGCCGTTCGAGCAGCTGCCGGAGGATTGGCGGTGCCCGACGTGCGGGGCGGCGAAGAGCTTCTTTGA
GAGTAAGAGTGTGGAGATTGCTGGGTTTGCACAGAATCAGCAGTACGGACTTGGAGGGAACGCTTTGACTTCTGGGCAGAAGGCTGTGCTTATATATGGAAGTTTGTTGT
TCTTCTTTGCTCTGTTTCTCTCTGGCTATTTCTTGCAA
Protein sequenceShow/hide protein sequence
SMAAYASARPTLSFHLSQPSLPIPRLNFKPPTAAATPAAIAPLQRSAAVRPSSLFALNSIDVSKEDKPTSDEPNPPAEEAAEKFDPRRLEEKFAVLNTGIYECRSCGHKF
DEAVGDPSYPIAPGLPFEQLPEDWRCPTCGAAKSFFESKSVEIAGFAQNQQYGLGGNALTSGQKAVLIYGSLLFFFALFLSGYFLQ