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MS006587 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006587
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold2140:49496..49649
RNA-Seq ExpressionMS006587
SyntenyMS006587
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4109387.1 hypothetical protein ERO13_1Z050202v2, partial [Gossypium hirsutum]8.6e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
PPR83387.1 hypothetical protein GOBAR_AA37329 [Gossypium barbadense]2.7e-1286.67Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQFWIQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
TYG79516.1 hypothetical protein ES288_D02G144500v1, partial [Gossypium darwinii]5.1e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
TYI03364.1 hypothetical protein ES332_A11G333500v1 [Gossypium tomentosum]1.1e-1084.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
TYJ12281.1 hypothetical protein E1A91_A11G338200v1, partial [Gossypium mustelinum]8.6e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
TrEMBL top hitse value%identityAlignment
A0A0D2S9P0 Uncharacterized protein9.3e-1182.22Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RM+KLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
A0A2P5VX61 Uncharacterized protein1.3e-1286.67Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQFWIQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
A0A5D2DGW6 Uncharacterized protein (Fragment)2.4e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
A0A5D2NJX8 Uncharacterized protein5.5e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
A0A5D2XHD7 Uncharacterized protein (Fragment)4.2e-1184.44Show/hide
Query:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
        +PIRRV +RMDKLTLTRQF IQF I LGGI KELECNNIDSYRRK
Subjt:  LPIRRVRDRMDKLTLTRQFWIQFEI-LGGIGKELECNNIDSYRRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCCTATTCGAAGAGTGCGTGACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTTGAAATTTTGGGAGGTATCGGGAAGGAATTGGAATGTAATAA
TATCGATTCATACAGAAGAAAAGGTTCTCTGTTGATTCAA
mRNA sequenceShow/hide mRNA sequence
CTTCCTATTCGAAGAGTGCGTGACCGCATGGATAAGCTCACACTAACCCGTCAATTTTGGATCCAATTTGAAATTTTGGGAGGTATCGGGAAGGAATTGGAATGTAATAA
TATCGATTCATACAGAAGAAAAGGTTCTCTGTTGATTCAA
Protein sequenceShow/hide protein sequence
LPIRRVRDRMDKLTLTRQFWIQFEILGGIGKELECNNIDSYRRKGSLLIQ