CuGenDBv2

Gene ID	MS006593
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	9,9'-di-cis-zeta-carotene desaturase
Genome location	scaffold2140:94260..94831
RNA-Seq Expression	MS006593
Synteny	MS006593
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022142986.1 uncharacterized protein LOC111012984 isoform X1 [Momordica charantia]

5.0e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

XP_022142988.1 uncharacterized protein LOC111012984 isoform X3 [Momordica charantia]

5.0e-61

96.77

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Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

XP_022142990.1 uncharacterized protein LOC111012984 isoform X5 [Momordica charantia]

9.1e-63

96.85

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Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVTGIF
        FVVAGVDDVLDILKSDYKNAYFVTGIF
Subjt:  FVVAGVDDVLDILKSDYKNAYFVTGIF

XP_022142992.1 uncharacterized protein LOC111012984 isoform X7 [Momordica charantia]

5.0e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

XP_022142993.1 uncharacterized protein LOC111012984 isoform X8 [Momordica charantia]

5.0e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CMH1 uncharacterized protein LOC111012984 isoform X5

4.4e-63

96.85

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVTGIF
        FVVAGVDDVLDILKSDYKNAYFVTGIF
Subjt:  FVVAGVDDVLDILKSDYKNAYFVTGIF

A0A6J1CNU8 uncharacterized protein LOC111012984 isoform X1

2.4e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

A0A6J1CPG8 uncharacterized protein LOC111012984 isoform X2

2.4e-61

96.77

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Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

A0A6J1CPH3 uncharacterized protein LOC111012984 isoform X7

2.4e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

A0A6J1CPM2 uncharacterized protein LOC111012984 isoform X3

2.4e-61

96.77

Show/hide

Query:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
        MAGIC SPPLPSSLSPKTKY VRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSS SS PKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE
Subjt:  MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEE

Query:  FVVAGVDDVLDILKSDYKNAYFVT
        FVVAGVDDVLDILKSDYKNAYFVT
Subjt:  FVVAGVDDVLDILKSDYKNAYFVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G04890.1 Uncharacterized conserved protein (DUF2358)

5.6e-10

36.22

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Query:  MAGI-CYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKE
        MAG+ C      SS   +     RCFS SP+       K+   ++K AVSGVTE LRL S + SS      K                       D  K 
Subjt:  MAGI-CYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKE

Query:  EFVVAGVDDVLDILKSDYKNAYFVTGI
        E     VDDV+ IL+SDY+N YFVTG+
Subjt:  EFVVAGVDDVLDILKSDYKNAYFVTGI

AT3G04890.2 Uncharacterized conserved protein (DUF2358)

5.6e-10

36.22

Show/hide

Query:  MAGI-CYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKE
        MAG+ C      SS   +     RCFS SP+       K+   ++K AVSGVTE LRL S + SS      K                       D  K 
Subjt:  MAGI-CYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKE

Query:  EFVVAGVDDVLDILKSDYKNAYFVTGI
        E     VDDV+ IL+SDY+N YFVTG+
Subjt:  EFVVAGVDDVLDILKSDYKNAYFVTGI

Sequences

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CDS sequence

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ATGGCCGGAATATGTTACTCTCCACCACTTCCTTCATCTCTATCCCCCAAGACGAAATACGGCGTACGATGTTTCTCAAGCTCGCCGGATAATTCTGGCGGTCGCCGGAA
GAAAGAGGCCTCTCCGATTGTGAAAATTGCAGTGAGTGGAGTCACGGAGCTTCTTAGGCTTTTCTCCTCTTCTAATAGTTCGGCGCCTAAATGGTTCATGAAAATGCGAC
CGGGACATATGAATTCAATTCTCTTTGGTCTATGTCTGAGTTGCAGATTTGATGGAGTTGGGGACAATCAGAAAGAGGAGTTTGTAGTTGCAGGCGTTGATGATGTTCTG
GACATCCTGAAATCAGATTACAAGAATGCTTACTTCGTTACAGGTATATTTATTTTGCATACTTCTATGGCTGTTCTG

mRNA sequence

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Protein sequence

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MAGICYSPPLPSSLSPKTKYGVRCFSSSPDNSGGRRKKEASPIVKIAVSGVTELLRLFSSSNSSAPKWFMKMRPGHMNSILFGLCLSCRFDGVGDNQKEEFVVAGVDDVL
DILKSDYKNAYFVTGIFILHTSMAVL

MS006593 (gene) of Bitter gourd (TR) v1 genome