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MS006608 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006608
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome b
Genome locationscaffold482:27272..27437
RNA-Seq ExpressionMS006608
SyntenyMS006608
Gene Ontology termsGO:0022904 - respiratory electron transport chain (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0045275 - respiratory chain complex III (cellular component)
GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005797 - Cytochrome b/b6, N-terminal
IPR016174 - Di-haem cytochrome, transmembrane
IPR027387 - Cytochrome b/b6-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAB51379.1 apocytochrome b [Nicotiana tabacum]6.0e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMF IVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
AAK37519.1 apocytochrome b [Triticum aestivum]7.9e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMH+TPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
KAF7053433.1 hypothetical protein CFC21_061362 [Triticum aestivum]7.9e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMH+TPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
QKE23437.1 apocytochrome b [Clerodendrum yunnanense]6.0e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMF IVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
XP_022933169.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111440021 [Cucurbita moschata]1.0e-1787.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFN VEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
TrEMBL top hitse value%identityAlignment
A0A3B6JFY0 Cytochrome b3.8e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMH+TPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
A0A6J1EYZ9 Cytochrome b5.0e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFN VEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
A0A6M8E0L9 Cytochrome b2.9e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMF IVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
O03194 Cytochrome b2.9e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMF IVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
Q9B3G0 Cytochrome b3.8e-1887.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMH+TPHVDLAFNSVEH+ RDVE GWLLCY+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
SwissProt top hitse value%identityAlignment
P04165 Cytochrome b6.7e-2087.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLL Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
P05718 Cytochrome b5.1e-2089.09Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEHV RDVE GWLL Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
P42792 Cytochrome b1.9e-1985.45Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLL Y+HANGASMF IVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
Q94S37 Cytochrome b1.9e-1985.45Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GW L Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
Q9ZZT8 Cytochrome b5.1e-2089.09Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEHV RDVE GWLL Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
Arabidopsis top hitse value%identityAlignment
AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal4.7e-2187.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLL Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
ATMG00220.1 apocytochrome b4.7e-2187.27Show/hide
Query:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV
        CLVIQIV GV LAMHYTPHVDLAFNSVEH+ RDVE GWLL Y+HANGASMFLIVV
Subjt:  CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVE-GWLLCYIHANGASMFLIVV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTTTAGTCATTCAAATAGTTAATGGCGTTCTTTTAGCTATGCATTACACACCTCATGTGGATCTAGCTTTCAACAGCGTAGAACACGTTACAAGAGATGTTGAAGGGTG
GTTGCTCTGTTATATACATGCTAATGGAGCAAGTATGTTTCTCATTGTGGTA
mRNA sequenceShow/hide mRNA sequence
TGTTTAGTCATTCAAATAGTTAATGGCGTTCTTTTAGCTATGCATTACACACCTCATGTGGATCTAGCTTTCAACAGCGTAGAACACGTTACAAGAGATGTTGAAGGGTG
GTTGCTCTGTTATATACATGCTAATGGAGCAAGTATGTTTCTCATTGTGGTA
Protein sequenceShow/hide protein sequence
CLVIQIVNGVLLAMHYTPHVDLAFNSVEHVTRDVEGWLLCYIHANGASMFLIVV