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MS006609 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006609
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationscaffold482:52793..54462
RNA-Seq ExpressionMS006609
SyntenyMS006609
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599112.1 hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4783.58Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI
        F+C CVK  I+ HRR S +   +SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVD+VIFVIWELIIL+FLVFSAVSLYFRHMQL F+
Subjt:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI

Query:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]3.6e-4886.86Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL
        F+CRC  SSI+    SS+E     SRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL
Subjt:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL

Query:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]1.6e-4886.86Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL
        F+CRC +SSI+    SS+E     SRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL
Subjt:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL

Query:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_022946845.1 uncharacterized protein LOC111450786 [Cucurbita moschata]3.1e-4784.33Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI
        F+C CVK  I+ HRR S +   +SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL F+
Subjt:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI

Query:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]3.2e-5291.11Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNS-SSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAF
        FVCRCVKSSI+  R SS+E     SRG+AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQLAF
Subjt:  FVCRCVKSSIIDHRRSSVEGNS-SSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAF

Query:  ILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        ILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  ILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein1.8e-4886.86Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL
        F+CRC  SSI+    SS+E     SRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL
Subjt:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL

Query:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X17.9e-4986.86Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL
        F+CRC +SSI+    SS+E     SRG  +AMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL
Subjt:  FVCRCVKSSIIDHRRSSVEGNS-SSRG--AAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQL

Query:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  AFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1G568 uncharacterized protein LOC1114507861.5e-4784.33Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI
        F+C CVK  I+ HRR S +   +SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL F+
Subjt:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI

Query:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1GHS6 uncharacterized protein LOC1114542822.5e-4785.93Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNSS-SRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAF
        FV  C KSS +  R +S E   + SRGAAMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLA 
Subjt:  FVCRCVKSSIIDHRRSSVEGNSS-SRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAF

Query:  ILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  ILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1KBR2 uncharacterized protein LOC1114940243.3e-4783.58Show/hide
Query:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI
        F+C CVK  I  HRR S +   +SRGAAMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIIL+FLVFSAVSLYFRHMQL F+
Subjt:  FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFI

Query:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        L+CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  LVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein3.8e-4387.74Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL+ILAF VFSAVSLYF+ +QLAFILVC+T+LLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein1.6e-4184.91Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL++LA +VFSAVSLYFR +QLAFIL+C+T+LLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCGTCTGCCGCTGTGTAAAATCCTCCATCATCGACCATCGCCGTAGCTCCGTAGAGGGAAACTCAAGCTCTCGGGGCGCAGCGATGATTACTCGATCGAATCTGGTTGA
GCAGTTGAGGGAATACCAGATTCGATCCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCCACCTCCAATATTACATCCTCAAGGGTGGATGTTGTTATTTTTGTAA
TATGGGAACTCATAATTCTAGCCTTCTTGGTGTTTTCGGCGGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACAATGTTGTTGCTTCTA
TGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATG
mRNA sequenceShow/hide mRNA sequence
TTCGTCTGCCGCTGTGTAAAATCCTCCATCATCGACCATCGCCGTAGCTCCGTAGAGGGAAACTCAAGCTCTCGGGGCGCAGCGATGATTACTCGATCGAATCTGGTTGA
GCAGTTGAGGGAATACCAGATTCGATCCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCCTCCACCTCCAATATTACATCCTCAAGGGTGGATGTTGTTATTTTTGTAA
TATGGGAACTCATAATTCTAGCCTTCTTGGTGTTTTCGGCGGTTTCTTTATATTTTCGGCATATGCAGTTGGCTTTTATTTTAGTATGCATCACAATGTTGTTGCTTCTA
TGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATG
Protein sequenceShow/hide protein sequence
FVCRCVKSSIIDHRRSSVEGNSSSRGAAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLAFILVCITMLLLL
CMKVTKQVRLARKKKRRMLLPLSM