; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006613 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006613
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L44
Genome locationscaffold482:96357..97194
RNA-Seq ExpressionMS006613
SyntenyMS006613
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004497 - monooxygenase activity (molecular function)
GO:0005506 - iron ion binding (molecular function)
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000552 - Ribosomal protein L44e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3462505.1 60S ribosomal protein L44-like [Gossypium australe]3.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

KAB1206304.1 60S ribosomal protein L44 [Morella rubra]3.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

KAF7152886.1 hypothetical protein RHSIM_Rhsim01G0066500 [Rhododendron simsii]3.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

KAG8473375.1 hypothetical protein CXB51_035498 [Gossypium anomalum]3.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

XP_019081385.1 PREDICTED: 60S ribosomal protein L44 isoform X1 [Vitis vinifera]3.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

TrEMBL top hitse value%identityAlignment
A0A218XE96 Uncharacterized protein1.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

A0A438EC72 60S ribosomal protein L441.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

A0A5B6V067 60S ribosomal protein L44-like1.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

A0A6A1V215 60S ribosomal protein L441.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

F6HF50 Uncharacterized protein1.9e-53100Show/hide
Query:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
        QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK
Subjt:  QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGK

Query:  GTSLF
        GTSLF
Subjt:  GTSLF

SwissProt top hitse value%identityAlignment
O23290 60S ribosomal protein L36a5.8e-5293.27Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKG
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSLF
        TSLF
Subjt:  TSLF

O59870 60S ribosomal protein L444.2e-4277.67Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VNVPKT++TYCK K C+KHT HKVTQYKKGKDS+ AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK+  Q  +KRCKHFE+GGDKK KG
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSL
         ++
Subjt:  TSL

P0CQ50 60S ribosomal protein L447.1e-4277.67Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK +G
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSL
         ++
Subjt:  TSL

P0CQ51 60S ribosomal protein L447.1e-4277.67Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VN+PKT++TYCK K CRKHT HKVTQYKKGKDSL+AQGKRRYDRKQSGYGGQTKPVFHKKAKTTKK+VLRL+C  CK   Q  +KRCKHFE+GGDKK +G
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSL
         ++
Subjt:  TSL

Q96499 60S ribosomal protein L441.5e-55100Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSLF
        TSLF
Subjt:  TSLF

Arabidopsis top hitse value%identityAlignment
AT3G23390.1 Zinc-binding ribosomal protein family protein4.1e-5393.27Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKG
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSLF
        TSLF
Subjt:  TSLF

AT4G14320.1 Zinc-binding ribosomal protein family protein4.1e-5393.27Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG
        VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEIGGDKKGKG
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG

Query:  TSLF
        TSLF
Subjt:  TSLF

AT4G14320.2 Zinc-binding ribosomal protein family protein1.1e-4592.39Show/hide
Query:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEI
        VN+PKTK TYCK+KEC+KHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQ CKH SQ PIKRCKHFEI
Subjt:  VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTGAACGTTCCCAAGACGAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAGTATAAGAAAGGAAAGGATAGTCTTGCTGC
ACAAGGAAAGCGTCGGTACGATCGTAAGCAGTCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTGTTAAGGTTGCAAT
GCCAAGGTTGCAAACACGTCTCCCAGCACCCTATCAAGAGATGCAAGCACTTTGAAATTGGAGGAGACAAGAAGGGCAAGGGAACTTCTCTTTTC
mRNA sequenceShow/hide mRNA sequence
CAGGTGAACGTTCCCAAGACGAAGAAGACTTATTGCAAGAGCAAGGAGTGCAGGAAGCACACCTTGCACAAGGTTACACAGTATAAGAAAGGAAAGGATAGTCTTGCTGC
ACAAGGAAAGCGTCGGTACGATCGTAAGCAGTCAGGATATGGAGGTCAGACCAAGCCTGTGTTTCACAAGAAGGCAAAAACTACCAAGAAGATTGTGTTAAGGTTGCAAT
GCCAAGGTTGCAAACACGTCTCCCAGCACCCTATCAAGAGATGCAAGCACTTTGAAATTGGAGGAGACAAGAAGGGCAAGGGAACTTCTCTTTTC
Protein sequenceShow/hide protein sequence
QVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF