; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006614 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006614
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold482:100129..101447
RNA-Seq ExpressionMS006614
SyntenyMS006614
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581551.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.4e-12595.08Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTS LLAKS   ANG TA RDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALNELYSKHTSQSV+IIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDKGS+
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

XP_022153186.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Momordica charantia]3.3e-132100Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

XP_022934626.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Cucurbita moschata]3.9e-12594.67Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTS LLAKS   ANG TA RDFRR YSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALNELYSKHTSQSV+IIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDKGS+
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

XP_023526138.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial-like [Cucurbita pepo subsp. pepo]6.1e-12695.49Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTS LLAKS   ANG TA RDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALNELYSKHTSQSV+IIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDKGS+
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

XP_038903213.1 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial [Benincasa hispida]2.7e-12695.92Show/hide
Query:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP
        MIWRSLASTSMLL AKST+ ANG TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSV+IIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDKGS+
Subjt:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

TrEMBL top hitse value%identityAlignment
A0A1S3CFJ3 ATP-dependent Clp protease proteolytic subunit3.2e-12596.28Show/hide
Query:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP
        MIWRSLASTSMLL AKST+ A+G TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDK
        YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDK

A0A5D3BXE8 ATP-dependent Clp protease proteolytic subunit3.2e-12596.28Show/hide
Query:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP
        MIWRSLASTSMLL AKST+ A+G TA RDFRRAYSL+PMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSP
Subjt:  MIWRSLASTSMLL-AKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSP

Query:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK
        GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK
Subjt:  GGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQK

Query:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDK
        YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDK
Subjt:  YMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDK

A0A6J1DJW7 ATP-dependent Clp protease proteolytic subunit1.6e-132100Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

A0A6J1F2B8 ATP-dependent Clp protease proteolytic subunit1.9e-12594.67Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTS LLAKS   ANG TA RDFRR YSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALNELYSKHTSQSV+IIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+EGKDKGS+
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

A0A6J1J553 ATP-dependent Clp protease proteolytic subunit1.2e-12495.04Show/hide
Query:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG
        MIWRSLASTS LLAKS   ANG TA RDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDT+HVVVAQLLFLESENPSKPINMYLNSPG
Subjt:  MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG

Query:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY
        GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIM+HQPSGGYSGQAKDM+IHTKQIVRVWDALNELYSKHTSQSV+IIQKY
Subjt:  GAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKY

Query:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKG
        MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVG+E KDKG
Subjt:  MDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKG

SwissProt top hitse value%identityAlignment
A1USA7 ATP-dependent Clp protease proteolytic subunit9.9e-7165.31Show/hide
Query:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SL+PMV+E T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR PI+T+C+GQAA
Subjt:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR
        SM SLLL AGAKG R SLPNA IM+HQPSGG+ GQA D+  H + I+R+   LNE+Y +HT Q  +II+  +DRD+FMT EEAK FG+ID+VI  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR

A9ISA4 ATP-dependent Clp protease proteolytic subunit4.9e-7063.27Show/hide
Query:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAA
Subjt:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR
        SM SLLL AGAKG R +LPNA IM+HQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  ++I++ +DRD+FMT EEAK FG++D+VI  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR

Q6G178 ATP-dependent Clp protease proteolytic subunit1.3e-7063.27Show/hide
Query:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAA
Subjt:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR
        SM SLLL AGAKG R +LPNA IM+HQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q  ++I++ +DRD+FMT EEAK+FG++D+VI  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR

Q6G3Z3 ATP-dependent Clp protease proteolytic subunit2.6e-7163.78Show/hide
Query:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA
        + A SL+PMVIE T+RGERAYDIFSRLLKERII INGP+ D  + +V AQLLFLE+ENP K I++Y+NSPGG VT+G+AIYDTMQ+IR P++T+C+GQAA
Subjt:  RRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAA

Query:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR
        SM SLLL AGAKG R +LPNA IM+HQPSGG+ GQA D+  H + I+++   LNE+Y +HT Q+ D+I++ +DRD+FMT EEAK+FG++D+VI  R
Subjt:  SMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQR

Q9FN42 ATP-dependent Clp protease proteolytic subunit 2, mitochondrial7.2e-10680.08Show/hide
Query:  RSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAV
        R L S + +L  S++P++  T+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDTSHVVVAQLL+LESENPSKPI+MYLNSPGG V
Subjt:  RSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAV

Query:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR
        TAGLAIYDTMQYIRSPI+TICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELY KHT Q +D++   MDR
Subjt:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR

Query:  DYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        D+FMTPEEAK FGIIDEVID+RP+ LV DAVG+E KDK S+
Subjt:  DYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.3e-4550Show/hide
Query:  ERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRS
        ER   I S+L + RII   G + DD ++++VAQLL+L++ +P+K I MY+NSPGG+VTAG+AI+DTM++IR  ++T+C+G AASM + LL+AG KG+R S
Subjt:  ERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRS

Query:  LPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVI
        LPN+ IMIHQP GG  G   D+ I   +++     LN   + HT QS++ I +  DRD+FM+ +EAKE+G+ID VI
Subjt:  LPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVI

AT1G66670.1 CLP protease proteolytic subunit 31.2e-3940.86Show/hide
Query:  DIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA
        D  + LL++RI+ +   + D T+ +V++QLL L++E+  + I +++NSPGG++TAG+ IYD M+  ++ ++T+CLG AASM + LLA+G+KG+R  +PN+
Subjt:  DIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNA

Query:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGD
         +MIHQP G   G+A +M+I  ++++     LN+++S+ T +    I+   DRD F+ P EAKE+G+ID VID     L+   +GD
Subjt:  TIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGD

AT4G17040.1 CLP protease R subunit 49.9e-3436.53Show/hide
Query:  LLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG--------GAV
        L A+S +P N  ++++  R   +++    + ++  +   D+ S L K RI+ +   +    + +++A+ L+L+ E+  KPI +Y+NS G        G  
Subjt:  LLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPG--------GAV

Query:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR
        T   AIYD M Y++ PI T+C+G A   A+LLL AGAKG R +LP++TIMI QP   + GQA D+ I  K+I  +   + +LYSKH  +S + I+  M R
Subjt:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR

Query:  DYFMTPEEAKEFGIIDEVI
          + +P EA E+GIID+V+
Subjt:  DYFMTPEEAKEFGIIDEVI

AT5G23140.1 nuclear-encoded CLP protease P75.2e-10780.08Show/hide
Query:  RSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAV
        R L S + +L  S++P++  T+    RR+YSLIPMVIEH+SRGERAYDIFSRLLKERIICINGPI+DDTSHVVVAQLL+LESENPSKPI+MYLNSPGG V
Subjt:  RSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAV

Query:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR
        TAGLAIYDTMQYIRSPI+TICLGQAASMASLLLAAGAKG+RRSLPNAT+MIHQPSGGYSGQAKD+TIHTKQIVRVWDALNELY KHT Q +D++   MDR
Subjt:  TAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDR

Query:  DYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN
        D+FMTPEEAK FGIIDEVID+RP+ LV DAVG+E KDK S+
Subjt:  DYFMTPEEAKEFGIIDEVIDQRPIALVTDAVGDEGKDKGSN

AT5G45390.1 CLP protease P48.4e-4142.18Show/hide
Query:  KSTSPANGTTAARDFRRAYSLIPM--VIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDT
        K  SP   TT+    R A + I M    E   RG  + D+   LL+ERI+ +   I D  +  +++QLL L++++P K I +++NSPGG+++A +AIYD 
Subjt:  KSTSPANGTTAARDFRRAYSLIPM--VIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIYDT

Query:  MQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEA
        +Q +R+ ++TI LG AAS AS++L AG KG+R ++PN  IMIHQP GG SGQA D+ I  K+++   + +  + +  TS+S + + K +DRD +M+P EA
Subjt:  MQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEA

Query:  KEFGIIDEVID
         E+G+ID VID
Subjt:  KEFGIIDEVID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTGGAGGAGTCTAGCTTCGACCTCAATGCTGCTCGCCAAATCCACCTCGCCGGCGAACGGAACAACGGCGGCGAGGGATTTCCGCCGCGCTTACAGCCTGATTCC
GATGGTGATTGAACACACATCGAGGGGAGAAAGAGCCTACGACATCTTCTCTCGCCTTCTCAAGGAGCGCATTATTTGCATCAACGGCCCCATTTCCGACGATACTTCTC
ATGTCGTCGTCGCTCAGCTCCTCTTTCTCGAGTCTGAGAACCCCTCGAAGCCCATCAATATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGTCTTGCTATATAT
GATACCATGCAGTACATCAGGTCTCCCATCAATACCATCTGTTTGGGTCAGGCTGCATCCATGGCTTCTCTTCTTCTAGCTGCAGGTGCCAAGGGTGAGAGACGATCGCT
TCCTAATGCAACCATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCGAAGGACATGACGATTCACACGAAACAGATTGTTCGGGTTTGGGATGCATTGAATG
AGCTGTACTCCAAGCATACATCACAGTCAGTAGATATTATTCAAAAGTATATGGATAGGGACTATTTTATGACCCCAGAAGAGGCAAAGGAGTTTGGCATAATCGACGAG
GTTATTGATCAAAGGCCAATAGCCCTGGTCACTGATGCAGTTGGTGATGAAGGCAAGGATAAAGGTTCAAAT
mRNA sequenceShow/hide mRNA sequence
ATGATTTGGAGGAGTCTAGCTTCGACCTCAATGCTGCTCGCCAAATCCACCTCGCCGGCGAACGGAACAACGGCGGCGAGGGATTTCCGCCGCGCTTACAGCCTGATTCC
GATGGTGATTGAACACACATCGAGGGGAGAAAGAGCCTACGACATCTTCTCTCGCCTTCTCAAGGAGCGCATTATTTGCATCAACGGCCCCATTTCCGACGATACTTCTC
ATGTCGTCGTCGCTCAGCTCCTCTTTCTCGAGTCTGAGAACCCCTCGAAGCCCATCAATATGTACCTCAACTCCCCCGGCGGCGCCGTCACTGCCGGTCTTGCTATATAT
GATACCATGCAGTACATCAGGTCTCCCATCAATACCATCTGTTTGGGTCAGGCTGCATCCATGGCTTCTCTTCTTCTAGCTGCAGGTGCCAAGGGTGAGAGACGATCGCT
TCCTAATGCAACCATCATGATTCACCAGCCTTCTGGTGGATACAGTGGGCAAGCGAAGGACATGACGATTCACACGAAACAGATTGTTCGGGTTTGGGATGCATTGAATG
AGCTGTACTCCAAGCATACATCACAGTCAGTAGATATTATTCAAAAGTATATGGATAGGGACTATTTTATGACCCCAGAAGAGGCAAAGGAGTTTGGCATAATCGACGAG
GTTATTGATCAAAGGCCAATAGCCCTGGTCACTGATGCAGTTGGTGATGAAGGCAAGGATAAAGGTTCAAAT
Protein sequenceShow/hide protein sequence
MIWRSLASTSMLLAKSTSPANGTTAARDFRRAYSLIPMVIEHTSRGERAYDIFSRLLKERIICINGPISDDTSHVVVAQLLFLESENPSKPINMYLNSPGGAVTAGLAIY
DTMQYIRSPINTICLGQAASMASLLLAAGAKGERRSLPNATIMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNELYSKHTSQSVDIIQKYMDRDYFMTPEEAKEFGIIDE
VIDQRPIALVTDAVGDEGKDKGSN