CuGenDBv2

Gene ID	MS006616
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LysM domain-containing protein
Genome location	scaffold482:120384..123225
RNA-Seq Expression	MS006616
Synteny	MS006616
Gene Ontology terms	NA
InterPro domains	IPR018392 - LysM domain IPR036779 - LysM domain superfamily IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6581549.1 hypothetical protein SDJN03_21551, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-165

83.2

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GR  GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLKPSEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSS GSN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGDSFVAADG    VRKSSSTSSLPD ENG T+SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

KAG7018054.1 hypothetical protein SDJN02_19920 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-165

83.2

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GR  GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLKPSEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSG-SNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSSG SN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSG-SNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGDSFVAADG    VRKSSSTSSLPD ENG T+SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

XP_022153133.1 uncharacterized protein LOC111020702 [Momordica charantia]

2.4e-209

98.95

Show/hide

Query:  MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP
        MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP
Subjt:  MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP

Query:  GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL
        GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL
Subjt:  GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL

Query:  LLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG
        LLMHHHRK KSLVNGFVGEKG MADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSN FSSSAGKGFLAQRPKASSRTNLAIDNEVG
Subjt:  LLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG

Query:  LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT-SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
Subjt:  LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT-SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

XP_022934623.1 uncharacterized protein LOC111441757 [Cucurbita moschata]

1.2e-165

82.95

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GR  GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLKPSEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSS GSN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGDSFVAADGF    RKSSSTSSLPD ENG  +SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

XP_022982635.1 uncharacterized protein LOC111481449 [Cucurbita maxima]

3.6e-165

82.95

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GRS GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLK SEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSS GSN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGD FVAADGF    RKSSSTSSLPD ENG T+SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DGQ0 uncharacterized protein LOC111020702

1.1e-209

98.95

Show/hide

Query:  MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP
        MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP
Subjt:  MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLP

Query:  GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL
        GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL
Subjt:  GRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDL

Query:  LLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG
        LLMHHHRK KSLVNGFVGEKG MADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSN FSSSAGKGFLAQRPKASSRTNLAIDNEVG
Subjt:  LLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG

Query:  LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT-SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
Subjt:  LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENGTT-SIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

A0A6J1F865 uncharacterized protein LOC111441757

5.9e-166

82.95

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GR  GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLKPSEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSS GSN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGDSFVAADGF    RKSSSTSSLPD ENG  +SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

A0A6J1GAX1 uncharacterized protein LOC111452356

4.5e-158

80.52

Show/hide

Query:  MERGRMNGNGNYDFSYESNGYHALDLGDVY-GESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        MERGRMNGNG  D+SYE NG+HALDL DVY GESTPNGRS GKTSQ +S  +CI+HPVSKLDTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGNYDFSYESNGYHALDLGDVY-GESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVW-KGTSHYLEDVPISGTQQLS
        PGRHPPSPCLL+   TPGQSSSERTPS RLSSDFFESFQSLKLK SEQR+S AMSSLQGYYGLK SDQ+SR +GF+ AV+ +G SH  ED+ +SGT Q  
Subjt:  PGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVW-KGTSHYLEDVPISGTQQLS

Query:  DLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEA-GDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDN
        D LLM HHRK +S VNGF+GEK E+AD+QSAEA GD DPKWN+KL+RRRQKSVADFSHSPEM+LKDDNSSGSN FSSSAGKG LAQRPK SSRTNLA DN
Subjt:  DLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEA-GDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDN

Query:  EVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
         VGLIPIPIGLGDS+VA DGF A VRKS STSSLPDPENG T+SIWS SKWSLKPDLQAIS+AS     GLP PLTGRRNKAALD
Subjt:  EVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

A0A6J1J3A0 uncharacterized protein LOC111481449

1.7e-165

82.95

Show/hide

Query:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
        MERGRMNGNGN  +D+SYESNGYHALDL DVYGE+TP GRS GKTSQVASS NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP
Subjt:  MERGRMNGNGN--YDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIP

Query:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ
        LPGRHPPSPCLL+G  T GQSSSE+TPS RLSS+FFESFQSLKLK SEQRVSPAMSSLQGYYGLK  DQKS+ D G+EMAV+ KG SHYLEDVP+SGT  
Subjt:  LPGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRND-GFEMAVW-KGTSHYLEDVPISGTQQ

Query:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI
            LL HHHRK KSLVNGF+GEKG++ D+QS EAGD DPKWN+KLIRRR KSVADFSH+PEM+LKDDNSS GSN FSS+AGKG LAQRPK SSRTNLA 
Subjt:  LSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSS-GSNCFSSSAGKGFLAQRPKASSRTNLAI

Query:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
        DN++GLIPIPIGLGD FVAADGF    RKSSSTSSLPD ENG T+SIWS SKWSLKPDLQAIS+ SRPIFDGLPIPLTGRRNKAALD
Subjt:  DNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

A0A6J1KCK3 uncharacterized protein LOC111493082

5.4e-159

Show/hide

Query:  MERGRMNGNGNYDFSYESNGYHALDLGDVY-GESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        MERGRM GNG  D+SYESNG+HALDL DVY GESTPNGRS GKTSQ +S  +CI+HPVSKLDTLAGVAIKYGVEVADI+KMNGLVTDFQMFALKSLQIPL
Subjt:  MERGRMNGNGNYDFSYESNGYHALDLGDVY-GESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Query:  PGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVW-KGTSHYLEDVPISGTQQLS
        PGRHPPSPCLL+   TPGQSSSERTPS RLSSDFFESF SLKLK SEQR+S AMSSLQGYYGLK SDQ+SR +GF+ AV+ +G SH  ED+ +SGT Q  
Subjt:  PGRHPPSPCLLDGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVW-KGTSHYLEDVPISGTQQLS

Query:  DLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEA-GDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDN
        D LLMHHHRK +S VNGF+GEK E+AD+ SAEA GD DPKWN+KL+RRRQKSVADFS+SPEM+LKDD+SSGSN FSSSAGK  LAQRPK SSR NLA DN
Subjt:  DLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEA-GDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDN

Query:  EVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD
         VGLIPIPIGLGDS+VA DGF A VRKS STSSLPDPENG T+SIW  SKWSLKPDLQAIS+ASRP+FDGLP PLTGRRNKAALD
Subjt:  EVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPENG-TTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

SwissProt top hits

e value

%identity

Alignment

A0JNI1 LysM and putative peptidoglycan-binding domain-containing protein 1

2.5e-04

43.08

Show/hide

Query:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        RS G   Q A SP     + H ++  DTLAG+A+KYGV +  IK+ N L T+  +F  K+L IP+
Subjt:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Q3B7I8 LysM and putative peptidoglycan-binding domain-containing protein 2

1.5e-04

45.31

Show/hide

Query:  RSPGKTSQVAS--SPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        RS G T+ VA+  S   I H +S  DTL G+A+KYGV +  IK+ N L +   +F  KSL IP+
Subjt:  RSPGKTSQVAS--SPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Q3KPL3 LysM and putative peptidoglycan-binding domain-containing protein 2

5.6e-04

43.75

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Query:  RSPGKTSQVAS--SPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        RS G T  VA+  +   I H +S  DTL G+A+KYGV +  IK+ N L +   +F  KSL IP+
Subjt:  RSPGKTSQVAS--SPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Q96S90 LysM and putative peptidoglycan-binding domain-containing protein 1

4.3e-04

43.08

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Query:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        RS G   Q A SP     + H +   DTLAG+A+KYGV +  IK+ N L T+  +F  K+L IP+
Subjt:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Q9N012 LysM and putative peptidoglycan-binding domain-containing protein 1

4.3e-04

43.08

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Query:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL
        RS G   Q A SP     + H +   DTLAG+A+KYGV +  IK+ N L T+  +F  K+L IP+
Subjt:  RSPGKTSQVASSP---NCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPL

Arabidopsis top hits

e value

%identity

Alignment

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein

2.0e-81

49.29

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Query:  ERGRMNGNGNYDFS----YESNGYHALD-LGDVYGESTPNG---RSPGKTSQ---VASSP----------NCIVHPVSKLDTLAGVAIKYGVEVADIKKM
        ER     NG  ++S     + NG+  LD L +   +S P     R P  TS     +SSP            I H +SK DTLAGVAIKYGVEVAD+KKM
Subjt:  ERGRMNGNGNYDFS----YESNGYHALD-LGDVYGESTPNG---RSPGKTSQ---VASSP----------NCIVHPVSKLDTLAGVAIKYGVEVADIKKM

Query:  NGLVTDFQMFALKSLQIPLPGRHPPSPCLLDGSITPGQSSSERTPS--QRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDG-FEMA
        N LVTD QMFALKSLQIPLPGRHPPSPCL +GS+  G+  S   P        + F+SFQSL+LK SE++VSPAM SLQGYYGLK +D+   + G FEM 
Subjt:  NGLVTDFQMFALKSLQIPLPGRHPPSPCLLDGSITPGQSSSERTPS--QRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDG-FEMA

Query:  VWK----------GTSHYLEDVPISGTQQLSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADF-SHSPEMVLKDDNS
         +K          G + YL   P + T        ++HHRK +SLVN  + E  +  D  + E        ++K +RRRQKS ADF S +PE+VLK++N 
Subjt:  VWK----------GTSHYLEDVPISGTQQLSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADF-SHSPEMVLKDDNS

Query:  SGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG-LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPE----NGTTSIWSTSKWSLKPDLQAISSASR
        S +  F S AGKG LA R KASSRTNLA ++E G   P+ + L D+ V +D FS+ VRKSSS SSL DP+    NG+ S+W TSKWSLKPDL   ++ + 
Subjt:  SGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVG-LIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDPE----NGTTSIWSTSKWSLKPDLQAISSASR

Query:  PIFDGLPIPLTGRRNKAALD
         IFDGLP PLTGRRNK ALD
Subjt:  PIFDGLPIPLTGRRNKAALD

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein

2.4e-79

48.13

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Query:  ERG-RMNG-NGNYDFSYES-NGYHALDLGDVYGESTPNGR---------SPGKTSQVASSPNC---IVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTD
        ERG R++G NG+++FS     GY  +D    + E +P+           +P  +S  +S+  C   I H VSK DTLAG+AIKYGVEVADI K+NGLVTD
Subjt:  ERG-RMNG-NGNYDFSYES-NGYHALDLGDVYGESTPNGR---------SPGKTSQVASSPNC---IVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTD

Query:  FQMFALKSLQIPLPGRHPPSPCLLDGSITPGQSSSERTPSQRLS---SDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTS
         QMFAL+SL+IPLPGRHPPSPCL +GS+  G+  SE+  S   +    D F+SFQSL+L  SE+++SPAM+SLQGYYGLK  ++++ ++GF MAV+K  +
Subjt:  FQMFALKSLQIPLPGRHPPSPCLLDGSITPGQSSSERTPSQRLS---SDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTS

Query:  HYLEDVPISGTQQLSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADF-SHSPEMVLKDDNSSGSNCFSSSAGKGFLA
          L+D     T   +    + HHRK +SLV+  + E  +  +   A  G+V+    +K +RRRQKS ADF S +PE++LK++N S S  FS+ AGK  LA
Subjt:  HYLEDVPISGTQQLSDLLLMHHHRKCKSLVNGFVGEKGEMADVQSAEAGDVDPKWNEKLIRRRQKSVADF-SHSPEMVLKDDNSSGSNCFSSSAGKGFLA

Query:  QRPKASSRTNLAIDNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDP--ENGTTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAAL
         R KASSR NL+ +    L  IPI L D+ V  D FS+ VRKS S SSL +P   +  +S+W TSKW+LKP+L    + +  IFDGLP PLTGRRNK A+
Subjt:  QRPKASSRTNLAIDNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSSLPDP--ENGTTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAAL

Query:  D
        D
Subjt:  D

Sequences

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CDS sequence

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ATGGAAAGGGGGCGGATGAACGGAAATGGGAATTATGATTTTAGTTACGAGAGCAATGGTTATCACGCGTTAGATCTAGGGGATGTCTATGGAGAGAGCACGCCAAATGG
AAGAAGCCCTGGGAAGACGTCGCAGGTTGCATCTTCTCCTAACTGCATCGTGCATCCGGTTTCTAAATTAGATACTCTCGCTGGAGTTGCAATCAAATATGGTGTCGAGG
TTGCAGATATAAAGAAGATGAATGGACTGGTCACAGACTTTCAAATGTTTGCTCTTAAATCTCTCCAGATTCCACTTCCTGGAAGACACCCTCCATCTCCTTGTTTATTG
GACGGTTCAATTACTCCAGGACAGAGCAGCTCCGAAAGGACCCCAAGTCAACGTCTTTCATCGGATTTCTTTGAGTCATTTCAGTCCCTCAAGTTGAAACCTTCAGAACA
GAGGGTCTCCCCAGCCATGAGCTCTTTACAAGGTTACTATGGGCTCAAATCATCTGATCAGAAGAGCAGAAACGATGGTTTTGAAATGGCAGTCTGGAAAGGCACGTCCC
ATTATTTAGAAGATGTGCCCATTTCGGGGACACAACAGCTTTCAGATTTGCTACTAATGCATCACCATCGAAAATGCAAAAGTTTAGTCAATGGATTTGTGGGTGAGAAA
GGAGAAATGGCAGATGTGCAATCTGCAGAAGCCGGGGATGTGGATCCCAAATGGAATGAGAAATTGATCAGAAGGCGCCAGAAATCTGTAGCTGACTTTTCCCATTCCCC
TGAAATGGTCTTGAAAGACGACAATAGCAGTGGAAGTAACTGTTTCTCGTCCTCTGCCGGAAAGGGCTTCTTGGCTCAAAGACCCAAAGCTTCTAGCAGAACTAATTTGG
CCATCGACAATGAGGTTGGGTTGATTCCAATTCCGATTGGGTTGGGGGATTCATTCGTGGCAGCTGACGGGTTCTCGGCGGTAGTAAGGAAGTCCTCGAGCACGTCGAGT
TTGCCAGACCCAGAAAATGGTACTACATCAATCTGGTCAACTTCAAAGTGGAGTTTGAAACCAGATTTACAGGCCATTTCGTCTGCTTCCAGACCAATATTTGATGGCTT
GCCAATACCTTTGACGGGTCGAAGAAACAAAGCTGCACTTGAT

mRNA sequence

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Protein sequence

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MERGRMNGNGNYDFSYESNGYHALDLGDVYGESTPNGRSPGKTSQVASSPNCIVHPVSKLDTLAGVAIKYGVEVADIKKMNGLVTDFQMFALKSLQIPLPGRHPPSPCLL
DGSITPGQSSSERTPSQRLSSDFFESFQSLKLKPSEQRVSPAMSSLQGYYGLKSSDQKSRNDGFEMAVWKGTSHYLEDVPISGTQQLSDLLLMHHHRKCKSLVNGFVGEK
GEMADVQSAEAGDVDPKWNEKLIRRRQKSVADFSHSPEMVLKDDNSSGSNCFSSSAGKGFLAQRPKASSRTNLAIDNEVGLIPIPIGLGDSFVAADGFSAVVRKSSSTSS
LPDPENGTTSIWSTSKWSLKPDLQAISSASRPIFDGLPIPLTGRRNKAALD

MS006616 (gene) of Bitter gourd (TR) v1 genome