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MS006621 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006621
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold482:175539..175769
RNA-Seq ExpressionMS006621
SyntenyMS006621
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009873 - ethylene-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136445.1 putative ETHYLENE INSENSITIVE 3-like 4 protein [Momordica charantia]1.7e-2171.95Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY
        S++ MGF  KNA TEHE QCVY NN VV AGQ SDEHAIDNHLKS+V     ELARA+PNS+EEA+MED GDGS SR VENY
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY

XP_022941732.1 putative ETHYLENE INSENSITIVE 3-like 4 protein [Cucurbita moschata]1.9e-0953.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S+ E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

XP_022980503.1 putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X1 [Cucurbita maxima]2.5e-0953.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S  E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

XP_022980511.1 putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X2 [Cucurbita maxima]2.5e-0953.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S  E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

XP_038892572.1 putative ETHYLENE INSENSITIVE 3-like 4 protein [Benincasa hispida]3.9e-1054.88Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY
        SKA MGF  KNA +EHE QCVY      GA + SD+ +ID HLKS+V     EL+RA P S +E ++ED  DGSGS TVE+Y
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY

TrEMBL top hitse value%identityAlignment
A0A6J1C3X1 putative ETHYLENE INSENSITIVE 3-like 4 protein8.1e-2271.95Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY
        S++ MGF  KNA TEHE QCVY NN VV AGQ SDEHAIDNHLKS+V     ELARA+PNS+EEA+MED GDGS SR VENY
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY

A0A6J1EN74 putative ETHYLENE INSENSITIVE 3-like 4 protein2.7e-0952.44Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY
        S+A MGFA KNA TEHE QC+Y         + +++  ID HLKS+V     EL+RA+P S+EE + ED  DGSGS TVENY
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVENY

A0A6J1FNB2 putative ETHYLENE INSENSITIVE 3-like 4 protein9.3e-1053.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S+ E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

A0A6J1ITS9 putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X21.2e-0953.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S  E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

A0A6J1IZH5 putative ETHYLENE INSENSITIVE 3-like 4 protein isoform X11.2e-0953.75Show/hide
Query:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE
        S+A  GFA KNA TEHE QCVY  +   G GQ S+E +ID HL S+V     EL+RA+P+S  E++++DGG GSGS TV+
Subjt:  SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIV-----ELARAKPNSNEEAQMEDGGDGSGSRTVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAAGGCGGCGATGGGATTTGCGTGCAAGAATGCGGGAACAGAGCACGAGATGCAGTGCGTATACATAAACAATGTCGTGGTGGGGGCGGGGCAATTATCAGACGAGCA
TGCAATCGACAACCATCTGAAGAGCATAGTGGAGCTGGCAAGGGCAAAACCAAACAGCAACGAGGAGGCGCAGATGGAGGATGGTGGAGATGGATCCGGGAGCAGGACAG
TGGAGAATTAC
mRNA sequenceShow/hide mRNA sequence
AGCAAGGCGGCGATGGGATTTGCGTGCAAGAATGCGGGAACAGAGCACGAGATGCAGTGCGTATACATAAACAATGTCGTGGTGGGGGCGGGGCAATTATCAGACGAGCA
TGCAATCGACAACCATCTGAAGAGCATAGTGGAGCTGGCAAGGGCAAAACCAAACAGCAACGAGGAGGCGCAGATGGAGGATGGTGGAGATGGATCCGGGAGCAGGACAG
TGGAGAATTAC
Protein sequenceShow/hide protein sequence
SKAAMGFACKNAGTEHEMQCVYINNVVVGAGQLSDEHAIDNHLKSIVELARAKPNSNEEAQMEDGGDGSGSRTVENY