CuGenDBv2

Gene ID	MS006630
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	scaffold191:24050..24163
RNA-Seq Expression	MS006630
Synteny	MS006630
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0048038 - quinone binding (molecular function) GO:0050136 - NADH dehydrogenase (quinone) activity (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG4151862.1 hypothetical protein ERO13_D04G096580v2 [Gossypium hirsutum]

5.2e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

QVD43967.1 NADH-plastoquinone oxidoreductase subunit 7 [Primula vilmoriniana]

4.0e-08

92.11

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S V LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

QXO03225.1 NADH-plastoquinone oxidoreductase subunit H [Dossinia marmorata]

5.2e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

QXO04863.1 NADH-plastoquinone oxidoreductase subunit H [Macodes petola]

5.2e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

QXO05207.1 NADH-plastoquinone oxidoreductase subunit H [Rhomboda lanceolata]

5.2e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

TrEMBL top hits

e value

%identity

Alignment

A0A0X9RBH8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.5e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

A0A191TFQ9 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.5e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

A0A2K9RM11 NADH-quinone oxidoreductase subunit D

4.3e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P + V LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

A0A5D2CZ19 Complex1_49kDa domain-containing protein

2.5e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

A0A6G5QBT8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.5e-08

89.47

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P S + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

SwissProt top hits

e value

%identity

Alignment

A6MM93 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.0e-10

86.84

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

A9LYF6 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.0e-10

86.84

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.0e-10

86.84

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

Q3V4X8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.0e-10

86.84

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

Q8S8U4 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.0e-10

86.84

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILPQLVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

3.1e-11

84.21

Show/hide

Query:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR
        P   + LQILP+LVKRMKLADIMTILGSIDIIMGEVDR
Subjt:  PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CCAACTAGTGGTGTTGGACTACAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGTATAGATATCATTATGGGAGAAGTTGA
TCGC

mRNA sequence

Show/hide mRNA sequence

CCAACTAGTGGTGTTGGACTACAAATTCTTCCTCAGTTAGTTAAAAGAATGAAATTGGCTGATATTATGACAATACTAGGTAGTATAGATATCATTATGGGAGAAGTTGA
TCGC

Protein sequence

Show/hide protein sequence

PTSGVGLQILPQLVKRMKLADIMTILGSIDIIMGEVDR

MS006630 (gene) of Bitter gourd (TR) v1 genome