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MS006635 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006635
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold191:136272..136502
RNA-Seq ExpressionMS006635
SyntenyMS006635
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150019.1 uncharacterized protein LOC111018297 [Momordica charantia]2.5e-1761.84Show/hide
Query:  FAIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRV
        +A+K++LL+YEKA GQK+NF+K AL FS N+   FK YM +I GMK VPHL DYLGLP SLS ++S DF  IKD V
Subjt:  FAIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRV

XP_024024678.1 uncharacterized protein LOC112092512 [Morus notabilis]5.6e-0943.42Show/hide
Query:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        AIK++L  YEKA GQ  NF+K ++ FSPN+  + KG +   +G+ +    + YLGLP  + +NK + FN++K+RVW
Subjt:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

XP_028068804.1 uncharacterized protein LOC114271378 [Camellia sinensis]1.2e-0844Show/hide
Query:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        ++ +L +YE   GQKIN EK A+ FS N+  D +  ++N MG+ ++     YLGLPY + ++K   FNS+KDRVW
Subjt:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

XP_028119114.1 uncharacterized protein LOC114316614 [Camellia sinensis]1.6e-0844Show/hide
Query:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        ++ +L +YE   GQKIN EK A+ FS N+  D +  ++N MG+ ++     YLGLPY + ++K   FNS+KDRVW
Subjt:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

XP_030930993.1 uncharacterized protein LOC115956857 [Quercus lobata]2.1e-0844Show/hide
Query:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        I+ +L  YEKA GQK+N EK  + FS  +H D K  + N + +  V   E YLGLP  + +NK++  N IK+RVW
Subjt:  IKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

TrEMBL top hitse value%identityAlignment
A0A6J1D8T0 uncharacterized protein LOC1110182971.2e-1761.84Show/hide
Query:  FAIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRV
        +A+K++LL+YEKA GQK+NF+K AL FS N+   FK YM +I GMK VPHL DYLGLP SLS ++S DF  IKD V
Subjt:  FAIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRV

A0A803PBD1 Uncharacterized protein2.4e-1043.42Show/hide
Query:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        AIK  L +Y+   GQ++NF+K +L FSPN    ++  +Q+ M +    HL+ YLGLP    ++KS  FNS+KDR+W
Subjt:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

A0A803PRL1 Uncharacterized protein2.4e-1043.42Show/hide
Query:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        AIK  L +Y+   GQ++NF+K +L FSPN    ++  +Q+ M +    HL+ YLGLP    ++KS  FNS+KDR+W
Subjt:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

A0A803Q1A0 Uncharacterized protein2.4e-1043.42Show/hide
Query:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        AIK  L +Y+   GQ++NF+K +L FSPN    ++  +Q+ M +    HL+ YLGLP    ++KS  FNS+KDR+W
Subjt:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

A0A803QIS8 Uncharacterized protein2.4e-1043.42Show/hide
Query:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW
        AIK  L +Y+   GQ++NF+K +L FSPN    ++  +Q+ M +    HL+ YLGLP    ++KS  FNS+KDR+W
Subjt:  AIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGCTATTAAAATGGTACTACTAGAATATGAAAAAGCTTATGGTCAGAAAATTAACTTTGAGAAGTTAGCTTTGGGGTTTTCACCAAATATTCATACCGATTTTAAGGG
CTACATGCAAAATATTATGGGAATGAAGTCGGTCCCTCATTTGGAAGATTATTTAGGCCTTCCATATAGCCTATCTCAAAATAAGAGCAAAGACTTCAATTCGATCAAAG
ACAGGGTGTGG
mRNA sequenceShow/hide mRNA sequence
TTTGCTATTAAAATGGTACTACTAGAATATGAAAAAGCTTATGGTCAGAAAATTAACTTTGAGAAGTTAGCTTTGGGGTTTTCACCAAATATTCATACCGATTTTAAGGG
CTACATGCAAAATATTATGGGAATGAAGTCGGTCCCTCATTTGGAAGATTATTTAGGCCTTCCATATAGCCTATCTCAAAATAAGAGCAAAGACTTCAATTCGATCAAAG
ACAGGGTGTGG
Protein sequenceShow/hide protein sequence
FAIKMVLLEYEKAYGQKINFEKLALGFSPNIHTDFKGYMQNIMGMKSVPHLEDYLGLPYSLSQNKSKDFNSIKDRVW