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MS006651 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006651
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold677:56247..56423
RNA-Seq ExpressionMS006651
SyntenyMS006651
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131652.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]1.6e-1162.71Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK S+T LL+HIR +LQRW Y+  T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

XP_022142677.1 uncharacterized protein LOC111012733 [Momordica charantia]1.2e-1164.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK  VT LL+HIR +LQRW Y+R T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

XP_022144030.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]1.4e-1264.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RYT MT+N  E +N +FRHAR+  VT LL+HIR LLQ W Y RWT+ASF++TTLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

XP_022153246.1 uncharacterized protein LOC111020781 [Momordica charantia]5.4e-1266.1Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK SVT LL+HIR +LQRW+Y+R T+AS + +TLSD TE
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

XP_022154964.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]2.0e-1164.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY QMTTNI E +N +FRHARK  VT LL+HIR +LQRW Y+R T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

TrEMBL top hitse value%identityAlignment
A0A6J1BRM2 protein FAR1-RELATED SEQUENCE 4-like7.6e-1262.71Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK S+T LL+HIR +LQRW Y+  T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

A0A6J1CNJ2 uncharacterized protein LOC1110127335.8e-1264.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK  VT LL+HIR +LQRW Y+R T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

A0A6J1CQH9 protein FAR1-RELATED SEQUENCE 4-like9.0e-1364.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RYT MT+N  E +N +FRHAR+  VT LL+HIR LLQ W Y RWT+ASF++TTLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

A0A6J1DK24 uncharacterized protein LOC1110207812.6e-1266.1Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY+QMTTNI E +N +FRHARK SVT LL+HIR +LQRW+Y+R T+AS + +TLSD TE
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

A0A6J1DNT3 protein FAR1-RELATED SEQUENCE 4-like9.9e-1264.41Show/hide
Query:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE
        RY QMTTNI E +N +FRHARK  VT LL+HIR +LQRW Y+R T+AS + +TLSDY E
Subjt:  RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATACACTCAAATGACCACTAATATAGATGAGTGCATGAATTTAATATTCAGGCATGCGCGCAAGTTTTCAGTCACAACTTTACTTGAGCATATTAGATGTTTGCTACA
AAGGTGGTTATATAAACGGTGGACAATTGCATCTTTCCAAACAACCACTTTGTCTGACTATACAGAG
mRNA sequenceShow/hide mRNA sequence
AGATACACTCAAATGACCACTAATATAGATGAGTGCATGAATTTAATATTCAGGCATGCGCGCAAGTTTTCAGTCACAACTTTACTTGAGCATATTAGATGTTTGCTACA
AAGGTGGTTATATAAACGGTGGACAATTGCATCTTTCCAAACAACCACTTTGTCTGACTATACAGAG
Protein sequenceShow/hide protein sequence
RYTQMTTNIDECMNLIFRHARKFSVTTLLEHIRCLLQRWLYKRWTIASFQTTTLSDYTE