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MS006666 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006666
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLaccase
Genome locationscaffold677:366287..366412
RNA-Seq ExpressionMS006666
SyntenyMS006666
Gene Ontology termsGO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016026.1 Laccase-12, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
XP_022133647.1 laccase-12 [Momordica charantia]7.2e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++SLFQP+PGTKGY LKYGSRV                 HLHGYDFYIV EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
XP_022939403.1 laccase-12-like [Cucurbita moschata]3.2e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
XP_022993163.1 laccase-12-like [Cucurbita maxima]3.2e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
XP_023551305.1 laccase-12-like [Cucurbita pepo subsp. pepo]3.2e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
TrEMBL top hitse value%identityAlignment
A0A6J1BXA5 laccase-123.5e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++SLFQP+PGTKGY LKYGSRV                 HLHGYDFYIV EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
A0A6J1FLJ6 Laccase1.6e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
A0A6J1GQY3 Laccase6.0e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQPIPGTKGY LKYGS V                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
A0A6J1K1E4 Laccase1.6e-1162.71Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V+QSLFQP+PGTKGY LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
W9QJ91 Laccase1.3e-1061.02Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++SL+QP+PGTKGY LKYGSRV                 HLHGYDFYIV EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
SwissProt top hitse value%identityAlignment
Q2QYS3 Laccase-231.2e-0850Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFN
        V+++L+QP+PGTK Y LKYGS V                 HLHGYDFYI+ EG GNF+
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFN
Q56YT0 Laccase-33.5e-0849.15Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++ L+QPI GTK Y LKY S V                 HLHGY FY+V  GFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
Q941X2 Laccase-37.8e-0845.76Show/hide
Query:  VTQSLFQPIPGTKGYILKYGS-----------------RVHLHGYDFYIVPEGFGNFNP
        V + L+QP+P TK Y LK+GS                  +H+HGYDFYI+ EGFGNF+P
Subjt:  VTQSLFQPIPGTKGYILKYGS-----------------RVHLHGYDFYIVPEGFGNFNP
Q9FLB5 Laccase-124.4e-1155.93Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        ++++LFQP+ GTK Y LKYGSRV                 HLHGYDFYIV EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
Q9SIY8 Laccase-52.9e-1054.24Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        +++SL+QP  GTK Y LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
Arabidopsis top hitse value%identityAlignment
AT2G29130.1 laccase 26.3e-0542.86Show/hide
Query:  GTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        GTK  +LKY + V                 HLHG++FY+V +GFGNFNP
Subjt:  GTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
AT2G30210.1 laccase 32.5e-0949.15Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++ L+QPI GTK Y LKY S V                 HLHGY FY+V  GFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
AT2G40370.1 laccase 52.0e-1154.24Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        +++SL+QP  GTK Y LKYGSRV                 HLHGYDFYI+ EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
AT5G05390.1 laccase 123.1e-1255.93Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        ++++LFQP+ GTK Y LKYGSRV                 HLHGYDFYIV EGFGNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
AT5G07130.1 laccase 138.0e-0844.07Show/hide
Query:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP
        V++ L+QP  GTK Y LK+ S+V                 HLHGY+FY+V  G GNFNP
Subjt:  VTQSLFQPIPGTKGYILKYGSRV-----------------HLHGYDFYIVPEGFGNFNP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTCACTCAGTCTCTTTTTCAACCGATCCCCGGAACTAAAGGCTACATTTTAAAATACGGATCGAGAGTTCATCTCCATGGCTACGATTTCTACATTGTCCCTGAAGGATT
TGGAAACTTTAACCCA
mRNA sequenceShow/hide mRNA sequence
GTCACTCAGTCTCTTTTTCAACCGATCCCCGGAACTAAAGGCTACATTTTAAAATACGGATCGAGAGTTCATCTCCATGGCTACGATTTCTACATTGTCCCTGAAGGATT
TGGAAACTTTAACCCA
Protein sequenceShow/hide protein sequence
VTQSLFQPIPGTKGYILKYGSRVHLHGYDFYIVPEGFGNFNP