; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006741 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006741
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionfasciclin-like arabinogalactan protein 12
Genome locationscaffold379:196956..198079
RNA-Seq ExpressionMS006741
SyntenyMS006741
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000782 - FAS1 domain
IPR036378 - FAS1 domain superfamily
IPR045003 - Fasciclin-like arabinogalactan protein, group A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583491.1 Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7984.95Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIG+FQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

KAG7019247.1 Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-7984.95Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIG+FQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

XP_022156947.1 fasciclin-like arabinogalactan protein 12 [Momordica charantia]1.2e-9498.92Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        K ELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGT+YSDNQLAVYQLDSVLRPIGIFQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

XP_022964662.1 fasciclin-like arabinogalactan protein 12 [Cucurbita moschata]1.5e-7984.95Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIG+FQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

XP_023519822.1 fasciclin-like arabinogalactan protein 12 [Cucurbita pepo subsp. pepo]8.6e-8085.48Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIGIFQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

TrEMBL top hitse value%identityAlignment
A0A0A0LVA0 Arabinogalactan protein 21.2e-7982.7Show/hide
Query:  NRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQK
        N +FS  I  L +F F  CS GQ+PAEAP PPPP NITKILEK GQF +LIRLLK+TQVANQIN+QLNDSNSELT+FAPTDNAFS+L+SGTLNSLND++K
Subjt:  NRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQK

Query:  VELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        VELLQFHMIPTFLSLSNFQT+SNP+RTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVY+DNQLA+YQ+DSVL+PIG+FQPR
Subjt:  VELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

A0A5A7UNV5 Fasciclin-like arabinogalactan protein 121.2e-7982.7Show/hide
Query:  NRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQK
        N +FS  I  L +F F  CS GQ+PAEAP PPPP NI+KILEK GQF +LIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++K
Subjt:  NRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQK

Query:  VELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        VELLQFHMIPTFLSLSNFQT+SNP+RTQAGDAYEFPLNVTTSGNSVN+SSGLVNTSISGTVY+DNQLA+YQ+DSVL+PIG+FQPR
Subjt:  VELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

A0A6J1DTA7 fasciclin-like arabinogalactan protein 126.0e-9598.92Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        K ELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGT+YSDNQLAVYQLDSVLRPIGIFQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

A0A6J1HIC8 fasciclin-like arabinogalactan protein 127.1e-8084.95Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIG+FQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

A0A6J1HZ28 fasciclin-like arabinogalactan protein 127.1e-8084.95Show/hide
Query:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        MN +FS  IF  FL+LF   S GQ+PAEAP PPPP NI++ILEK GQF+ILIRLLKSTQVANQIN+QLNDSNSELTIFAPTDNAFS+L+SGTLNSLND++
Subjt:  MNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        KVELLQFHMIPTFLSLSNFQTVSNP+RTQAGDAYEFPLNVTTSGNSVNVSSGL NTSISGTVYSDNQLAVYQ+DSVL+PIG+FQPR
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

SwissProt top hitse value%identityAlignment
Q8LEE9 Fasciclin-like arabinogalactan protein 123.0e-5968.26Show/hide
Query:  SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQT
        S  +PA APAPP PTN+TKILEKAGQFT+ IRLLKST VANQ+  QLN+S++ +TIFAP+D++F+ LK+GTLNSL DEQ+VEL+QFH+IP+++S SNFQT
Subjt:  SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQT

Query:  VSNPLRTQAGDAYE--FPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        +SNPLRTQAGD+ +  FPLNVTTSGN+VN++SG+ NT++SG VYSD QLAVYQ+D VL P  +F PR
Subjt:  VSNPLRTQAGDAYE--FPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

Q8LEJ6 Fasciclin-like arabinogalactan protein 119.9e-5563.89Show/hide
Query:  IFS-LFL-FLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSE-LTIFAPTDNAFSSLKSGTLNSLNDEQKVELL
        IFS LF+ FL    + GQAP  AP P  PTNIT ILEKAGQFT+ IRLLKSTQ ++QIN+QLN S+S  LT+FAPTDNAF+SLKSGTLNSL+D+QKV+L+
Subjt:  IFS-LFL-FLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSE-LTIFAPTDNAFSSLKSGTLNSLNDEQKVELL

Query:  QFHMIPTFLSLSNFQTVSNPLRTQAGDAY--EFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        QFH++PT +++  FQTVSNPLRTQAGD    +FPLN+T+SGN VN+++G+V+ +++ +VYSD QLAVYQ+D VL P+ +F
Subjt:  QFHMIPTFLSLSNFQTVSNPLRTQAGDAY--EFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

Q9FFH6 Fasciclin-like arabinogalactan protein 131.8e-3545.95Show/hide
Query:  SPAIFSLFLFLFFRCS-SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVEL
        +P +  L   +F     + Q  A AP P  P NIT ILEK GQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDNAF +LK GTLN L+ + +V+L
Subjt:  SPAIFSLFLFLFFRCS-SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVEL

Query:  LQFHMIPTFLSLSNFQTVSNPLRTQAGD---AYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        + +H+ P F +L +  +VSNP+RTQA        + LN T  GN VNVS+G+V T +S ++  +  LAVY +D VL P  +F  R
Subjt:  LQFHMIPTFLSLSNFQTVSNPLRTQAGD---AYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

Q9SIL7 Fasciclin-like arabinogalactan protein 61.8e-3245.99Show/hide
Query:  SPAIFSLFLFLFFRCSSGQAPAEAPAPPP-----PTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        S ++FS  + L F  +     ++  AP P     P N+T ILE   QFT LI+LL +TQV  Q++ QLN S+  +TIFAPTDNAF+ LK GTLNSL  +Q
Subjt:  SPAIFSLFLFLFFRCSSGQAPAEAPAPPP-----PTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQA--GDAYEFPLNVT--TSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        +++L+ +H+IP + SLS+    SNP+RTQA   D   F LN T     N VNVS+G+V T I+  +     LAVY +DSVL P  +F
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQA--GDAYEFPLNVT--TSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

Q9ZWA8 Fasciclin-like arabinogalactan protein 91.7e-3347.27Show/hide
Query:  SSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQ
        ++ Q  A AP P  P N+T ILEK GQFT  I LL  TQV +Q+N Q+N S+  +T+FAPTDNAF +LK GTLN L+ + +V+L+ +H+ P + S+ +  
Subjt:  SSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQ

Query:  TVSNPLRTQAG--DAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        +VSNP+RTQA   D   + LN T   N +NVS+G V T IS ++     LAVY +D VL P  +F
Subjt:  TVSNPLRTQAG--DAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

Arabidopsis top hitse value%identityAlignment
AT1G03870.1 FASCICLIN-like arabinoogalactan 91.2e-3447.27Show/hide
Query:  SSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQ
        ++ Q  A AP P  P N+T ILEK GQFT  I LL  TQV +Q+N Q+N S+  +T+FAPTDNAF +LK GTLN L+ + +V+L+ +H+ P + S+ +  
Subjt:  SSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQ

Query:  TVSNPLRTQAG--DAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        +VSNP+RTQA   D   + LN T   N +NVS+G V T IS ++     LAVY +D VL P  +F
Subjt:  TVSNPLRTQAG--DAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

AT2G20520.1 FASCICLIN-like arabinogalactan 61.3e-3345.99Show/hide
Query:  SPAIFSLFLFLFFRCSSGQAPAEAPAPPP-----PTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ
        S ++FS  + L F  +     ++  AP P     P N+T ILE   QFT LI+LL +TQV  Q++ QLN S+  +TIFAPTDNAF+ LK GTLNSL  +Q
Subjt:  SPAIFSLFLFLFFRCSSGQAPAEAPAPPP-----PTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQ

Query:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQA--GDAYEFPLNVT--TSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        +++L+ +H+IP + SLS+    SNP+RTQA   D   F LN T     N VNVS+G+V T I+  +     LAVY +DSVL P  +F
Subjt:  KVELLQFHMIPTFLSLSNFQTVSNPLRTQA--GDAYEFPLNVT--TSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

AT5G03170.1 FASCICLIN-like arabinogalactan-protein 117.1e-5663.89Show/hide
Query:  IFS-LFL-FLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSE-LTIFAPTDNAFSSLKSGTLNSLNDEQKVELL
        IFS LF+ FL    + GQAP  AP P  PTNIT ILEKAGQFT+ IRLLKSTQ ++QIN+QLN S+S  LT+FAPTDNAF+SLKSGTLNSL+D+QKV+L+
Subjt:  IFS-LFL-FLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSE-LTIFAPTDNAFSSLKSGTLNSLNDEQKVELL

Query:  QFHMIPTFLSLSNFQTVSNPLRTQAGDAY--EFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF
        QFH++PT +++  FQTVSNPLRTQAGD    +FPLN+T+SGN VN+++G+V+ +++ +VYSD QLAVYQ+D VL P+ +F
Subjt:  QFHMIPTFLSLSNFQTVSNPLRTQAGDAY--EFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIF

AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor1.3e-3645.95Show/hide
Query:  SPAIFSLFLFLFFRCS-SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVEL
        +P +  L   +F     + Q  A AP P  P NIT ILEK GQF  LIRLL +TQ+ NQIN Q+N S+  +T+ APTDNAF +LK GTLN L+ + +V+L
Subjt:  SPAIFSLFLFLFFRCS-SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVEL

Query:  LQFHMIPTFLSLSNFQTVSNPLRTQAGD---AYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        + +H+ P F +L +  +VSNP+RTQA        + LN T  GN VNVS+G+V T +S ++  +  LAVY +D VL P  +F  R
Subjt:  LQFHMIPTFLSLSNFQTVSNPLRTQAGD---AYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR

AT5G60490.1 FASCICLIN-like arabinogalactan-protein 122.1e-6068.26Show/hide
Query:  SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQT
        S  +PA APAPP PTN+TKILEKAGQFT+ IRLLKST VANQ+  QLN+S++ +TIFAP+D++F+ LK+GTLNSL DEQ+VEL+QFH+IP+++S SNFQT
Subjt:  SGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHMIPTFLSLSNFQT

Query:  VSNPLRTQAGDAYE--FPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR
        +SNPLRTQAGD+ +  FPLNVTTSGN+VN++SG+ NT++SG VYSD QLAVYQ+D VL P  +F PR
Subjt:  VSNPLRTQAGDAYE--FPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCATGAATCGCGTCTTCTCTCCCGCGATTTTCTCTCTTTTTCTCTTTCTCTTCTTCCGTTGCAGCTCGGGCCAGGCACCAGCCGAGGCCCCGGCGCCGCCTCCGCCGAC
AAATATCACAAAAATACTGGAAAAGGCTGGCCAGTTCACGATTCTGATCAGACTCTTGAAGAGCACTCAAGTGGCGAATCAAATTAACAGTCAGCTTAATGACTCCAATT
CTGAACTCACCATTTTCGCCCCCACTGATAATGCTTTCTCTAGTCTCAAATCGGGCACTCTAAATTCGTTGAACGACGAACAAAAAGTAGAGCTTCTCCAATTCCACATG
ATTCCCACGTTCCTTTCGCTCTCAAACTTCCAAACTGTGAGCAATCCGTTGAGAACTCAGGCCGGCGACGCCTACGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTC
CGTCAACGTTTCTTCCGGCCTCGTCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAACTCGCCGTCTACCAGCTCGACTCCGTCCTCAGGCCCATCGGCATCT
TCCAGCCCCGC
mRNA sequenceShow/hide mRNA sequence
ATCATGAATCGCGTCTTCTCTCCCGCGATTTTCTCTCTTTTTCTCTTTCTCTTCTTCCGTTGCAGCTCGGGCCAGGCACCAGCCGAGGCCCCGGCGCCGCCTCCGCCGAC
AAATATCACAAAAATACTGGAAAAGGCTGGCCAGTTCACGATTCTGATCAGACTCTTGAAGAGCACTCAAGTGGCGAATCAAATTAACAGTCAGCTTAATGACTCCAATT
CTGAACTCACCATTTTCGCCCCCACTGATAATGCTTTCTCTAGTCTCAAATCGGGCACTCTAAATTCGTTGAACGACGAACAAAAAGTAGAGCTTCTCCAATTCCACATG
ATTCCCACGTTCCTTTCGCTCTCAAACTTCCAAACTGTGAGCAATCCGTTGAGAACTCAGGCCGGCGACGCCTACGAGTTCCCTCTCAACGTCACCACCTCCGGCAACTC
CGTCAACGTTTCTTCCGGCCTCGTCAACACCTCCATCTCCGGCACCGTCTACTCCGACAACCAACTCGCCGTCTACCAGCTCGACTCCGTCCTCAGGCCCATCGGCATCT
TCCAGCCCCGC
Protein sequenceShow/hide protein sequence
IMNRVFSPAIFSLFLFLFFRCSSGQAPAEAPAPPPPTNITKILEKAGQFTILIRLLKSTQVANQINSQLNDSNSELTIFAPTDNAFSSLKSGTLNSLNDEQKVELLQFHM
IPTFLSLSNFQTVSNPLRTQAGDAYEFPLNVTTSGNSVNVSSGLVNTSISGTVYSDNQLAVYQLDSVLRPIGIFQPR