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MS006742 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006742
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold379:244655..244939
RNA-Seq ExpressionMS006742
SyntenyMS006742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056639.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.4e-0634Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV------VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR
        G WD+    Y G  LKG++V ++I++  L D LY L  V      ++IR +  +  E    +PP  L+ND DL+F ++ +    VPL VS   R N  ++
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV------VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR

XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]6.2e-1848.94Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVR--IRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIE
        G W+D  N+YVG +LKG++VP  ++Y +L +RL+RL+ V +     VIRVPY L   SPP+++T+D DLRF LV +Q+ +VPL VST+ R +I+
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVR--IRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIE

XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]3.1e-0940.48Show/hide
Query:  WDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS
        WD+  N YVG +L G++VP  + Y +    +YR+ NV  +    V+RV Y+L + +PPLY+ ND D+   L  D L RV L V+
Subjt:  WDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]2.9e-0733.72Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS
        G WD+  ++ +  QL G+LVP  + Y ++   +Y + NV       +++V Y+L Y +PP Y+ ND  +RF+L  + L R+ L V+
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]2.9e-0733.72Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS
        G WD+  ++ +  QL G+LVP  + Y ++   +Y + NV       +++V Y+L Y +PP Y+ ND  +RF+L  + L R+ L V+
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS

TrEMBL top hitse value%identityAlignment
A0A5A7UT04 MuDRA-like transposase6.9e-0734Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV------VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR
        G WD+    Y G  LKG++V ++I++  L D LY L  V      ++IR +  +  E    +PP  L+ND DL+F ++ +    VPL VS   R N  ++
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV------VRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR

A0A5D3CHB1 MuDRA-like transposase3.4e-0635.71Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTY--SSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR
        G WD+    Y G  LKG++V ++I++  L D+LY L+ V  V     IR  YE+     +PP  L N+ DL+F ++ +    VPL VS   R N  ++
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINV--VRIRSVIRVPYELTY--SSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERR

A0A6J1DL08 uncharacterized protein LOC1110220713.0e-1848.94Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVR--IRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIE
        G W+D  N+YVG +LKG++VP  ++Y +L +RL+RL+ V +     VIRVPY L   SPP+++T+D DLRF LV +Q+ +VPL VST+ R +I+
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVR--IRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIE

A0A6J1DPC2 uncharacterized protein LOC111022579 isoform X29.1e-0737.5Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVRIRSVIRVP--YEL--TYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS
        GVW+D+   Y G  LKG++V ++I+Y  LLD LY L       S +++   YE+     +PP  ++ND DL F L+ +    VPL +S
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVRIRSVIRVP--YEL--TYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS

A0A6J1DRN0 uncharacterized protein LOC111022579 isoform X19.1e-0737.5Show/hide
Query:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVRIRSVIRVP--YEL--TYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS
        GVW+D+   Y G  LKG++V ++I+Y  LLD LY L       S +++   YE+     +PP  ++ND DL F L+ +    VPL +S
Subjt:  GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVRIRSVIRVP--YEL--TYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGCGTGTGGGATGATAGAAACAATACCTACGTCGGCGATCAATTGAAAGGATTACTAGTGCCACAGGATATTTCGTATAGTCAGTTGCTTGACCGTTTGTACAGACTAAT
CAATGTAGTCCGAATTCGATCCGTGATCAGAGTTCCTTATGAATTGACGTACAGTTCGCCCCCATTGTACCTAACGAACGACGGTGACCTACGGTTTGTGCTTGTACATG
ATCAGCTAGGTAGAGTGCCATTGTTAGTTTCGACCGTACGAAGAGGGAACATTGAACGTCGCCCC
mRNA sequenceShow/hide mRNA sequence
GGCGTGTGGGATGATAGAAACAATACCTACGTCGGCGATCAATTGAAAGGATTACTAGTGCCACAGGATATTTCGTATAGTCAGTTGCTTGACCGTTTGTACAGACTAAT
CAATGTAGTCCGAATTCGATCCGTGATCAGAGTTCCTTATGAATTGACGTACAGTTCGCCCCCATTGTACCTAACGAACGACGGTGACCTACGGTTTGTGCTTGTACATG
ATCAGCTAGGTAGAGTGCCATTGTTAGTTTCGACCGTACGAAGAGGGAACATTGAACGTCGCCCC
Protein sequenceShow/hide protein sequence
GVWDDRNNTYVGDQLKGLLVPQDISYSQLLDRLYRLINVVRIRSVIRVPYELTYSSPPLYLTNDGDLRFVLVHDQLGRVPLLVSTVRRGNIERRP