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MS006749 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006749
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionalpha/beta-Hydrolases superfamily protein
Genome locationscaffold60:7408..7638
RNA-Seq ExpressionMS006749
SyntenyMS006749
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142422.1 uncharacterized protein LOC111012560 [Momordica charantia]5.4e-3698.7Show/hide
Query:  MMTGIGIGVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        MMTGIG+GVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
Subjt:  MMTGIGIGVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

XP_022142537.1 uncharacterized protein LOC111012627 [Momordica charantia]1.6e-1967.53Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IG AF    +GWVYK LKPP PK         V+SPRVKLSDGRHLAY+EVGVPKEEAQYKII+SHGY++ KDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

XP_022142538.1 uncharacterized protein LOC111012628 [Momordica charantia]1.3e-1866.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQYKII+ HGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

XP_022970316.1 uncharacterized protein LOC111469316 isoform X1 [Cucurbita maxima]3.9e-1866.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQ KII+SHGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

XP_022970317.1 uncharacterized protein LOC111469316 isoform X2 [Cucurbita maxima]3.9e-1866.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQ KII+SHGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

TrEMBL top hitse value%identityAlignment
A0A6J1CL81 uncharacterized protein LOC1110126286.4e-1966.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQYKII+ HGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

A0A6J1CN23 uncharacterized protein LOC1110126277.6e-2067.53Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IG AF    +GWVYK LKPP PK         V+SPRVKLSDGRHLAY+EVGVPKEEAQYKII+SHGY++ KDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

A0A6J1CN82 uncharacterized protein LOC1110125602.6e-3698.7Show/hide
Query:  MMTGIGIGVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        MMTGIG+GVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
Subjt:  MMTGIGIGVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

A0A6J1HYS2 uncharacterized protein LOC111469316 isoform X21.9e-1866.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQ KII+SHGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

A0A6J1I094 uncharacterized protein LOC111469316 isoform X11.9e-1866.23Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        IGVAFA   +GWVY+ LKP PPK         V+SPRVKL+DGRHLAY+E GVPKEEAQ KII+SHGY+ SKDM+ P
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03230.1 alpha/beta-Hydrolases superfamily protein5.2e-1354.1Show/hide
Query:  WVYKGLKPPP----PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDM
        +VYK + PPP    P+  +  SPR+KL+DGRHLAYKE+G PK++A+ KII+ HG  +SKD+
Subjt:  WVYKGLKPPP----PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDM

AT3G03240.1 alpha/beta-Hydrolases superfamily protein1.5e-1254.24Show/hide
Query:  WVYKGLKPPP----PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSK
        +VYK +KPPP    P+  +  SPR+KL+DGR+LAYKE+G PK++A+ KII+ HG+  SK
Subjt:  WVYKGLKPPP----PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSK

AT3G48410.1 alpha/beta-Hydrolases superfamily protein1.0e-1349.33Show/hide
Query:  VAFAAVGVGWVYKGLKPPP------PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDD-SKDMHF
        V F  V + WVY+ ++PPP      P    V+SPR+KL DGRHLAY E G+P++EA++KII  HG+D   +D HF
Subjt:  VAFAAVGVGWVYKGLKPPP------PKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDD-SKDMHF

AT5G22460.1 alpha/beta-Hydrolases superfamily protein5.0e-1649.35Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        + VA     +G++Y+  KPPPP+         V+SPR+KLSDGR+LAY+E GV ++ A YKIIV HG++ SKD  FP
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP

AT5G22460.2 alpha/beta-Hydrolases superfamily protein5.0e-1649.35Show/hide
Query:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP
        + VA     +G++Y+  KPPPP+         V+SPR+KLSDGR+LAY+E GV ++ A YKIIV HG++ SKD  FP
Subjt:  IGVAFAAVGVGWVYKGLKPPPPKAYA------VSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACGGGAATAGGAATAGGAGTAGCATTTGCAGCGGTTGGTGTTGGATGGGTTTATAAAGGACTCAAACCTCCACCTCCAAAGGCATATGCAGTGAGTTCCCCAAG
AGTAAAGCTGAGTGATGGGAGGCATTTGGCCTACAAAGAAGTTGGAGTTCCTAAGGAAGAGGCTCAATACAAGATCATTGTTTCTCATGGCTATGATGACTCCAAAGATA
TGCACTTTCCT
mRNA sequenceShow/hide mRNA sequence
ATGATGACGGGAATAGGAATAGGAGTAGCATTTGCAGCGGTTGGTGTTGGATGGGTTTATAAAGGACTCAAACCTCCACCTCCAAAGGCATATGCAGTGAGTTCCCCAAG
AGTAAAGCTGAGTGATGGGAGGCATTTGGCCTACAAAGAAGTTGGAGTTCCTAAGGAAGAGGCTCAATACAAGATCATTGTTTCTCATGGCTATGATGACTCCAAAGATA
TGCACTTTCCT
Protein sequenceShow/hide protein sequence
MMTGIGIGVAFAAVGVGWVYKGLKPPPPKAYAVSSPRVKLSDGRHLAYKEVGVPKEEAQYKIIVSHGYDDSKDMHFP