; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006765 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006765
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein PP2-A13-like
Genome locationscaffold60:217877..218044
RNA-Seq ExpressionMS006765
SyntenyMS006765
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582587.1 F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1475Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
KAG7018971.1 F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1475Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
XP_022147516.1 F-box protein PP2-A13-like [Momordica charantia]1.0e-1578.57Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMHLD PEIC+LAGVN+LFR  ASADFIWE+KL  +YQFLMDKA EL+GK K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
XP_022924583.1 F-box protein PP2-A13-like [Cucurbita moschata]1.1e-1475Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
XP_022980370.1 F-box protein PP2-A13-like [Cucurbita maxima]1.1e-1475Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
TrEMBL top hitse value%identityAlignment
A0A6J1D2L7 F-box protein PP2-A13-like4.8e-1678.57Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMHLD PEIC+LAGVN+LFR  ASADFIWE+KL  +YQFLMDKA EL+GK K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
A0A6J1ECW2 F-box protein PP2-A13-like5.3e-1575Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
A0A6J1FNZ3 F-box protein PP2-A13-like1.3e-1371.43Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN+LFR  ASADF+WE KL  +YQFL+DKALE   K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
A0A6J1I9B1 F-box protein PP2-A13-like4.5e-1473.21Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN+LFR  ASADF+WE KL  +YQFL+DKALEL  K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
A0A6J1IW34 F-box protein PP2-A13-like5.3e-1575Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
        VALVLMH+D PEIC+LAGVN++FR  ASADFIWE KL  +YQFLMDKALE N K K
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK
SwissProt top hitse value%identityAlignment
Q9CAN4 F-box protein PP2-A111.3e-0544.9Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKAL
        VAL+L +LD  EICR + +N  F   + ADF+WE KL   Y+ +++K L
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKAL
Q9FJ80 F-box protein PP2-A146.3e-0540Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
        +  + M+++ PEIC LA VN+ F   + +D +WE KL  +Y+FL+ + LE
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
Q9LEX0 F-box protein PP2-A131.6e-0852Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
        VAL++  LD PEICRLA +N++FR  +SADFIWE KL  +Y+ +  K  +
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
Q9LF92 F-box protein PP2-A152.3e-0756.52Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMD
        VA V M+L  PEIC LAG+N+ FR  AS+D +WE KL  +YQ L+D
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMD
Arabidopsis top hitse value%identityAlignment
AT1G63090.1 phloem protein 2-A119.0e-0744.9Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKAL
        VAL+L +LD  EICR + +N  F   + ADF+WE KL   Y+ +++K L
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKAL
AT3G53000.1 phloem protein 2-A151.6e-0856.52Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMD
        VA V M+L  PEIC LAG+N+ FR  AS+D +WE KL  +YQ L+D
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMD
AT3G61060.1 phloem protein 2-A131.1e-0952Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
        VAL++  LD PEICRLA +N++FR  +SADFIWE KL  +Y+ +  K  +
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
AT3G61060.2 phloem protein 2-A131.1e-0952Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
        VAL++  LD PEICRLA +N++FR  +SADFIWE KL  +Y+ +  K  +
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
AT5G52120.1 phloem protein 2-A144.5e-0640Show/hide
Query:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE
        +  + M+++ PEIC LA VN+ F   + +D +WE KL  +Y+FL+ + LE
Subjt:  VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGCTCTAGTTCTGATGCATTTGGACTCGCCGGAGATTTGCAGATTGGCCGGAGTCAACCAACTATTTCGCAGCACCGCGTCGGCGGATTTCATATGGGAATTCAAATT
GTCTTTGCACTATCAATTTCTGATGGACAAAGCATTAGAACTCAACGGAAAAAGAAAG
mRNA sequenceShow/hide mRNA sequence
GTGGCTCTAGTTCTGATGCATTTGGACTCGCCGGAGATTTGCAGATTGGCCGGAGTCAACCAACTATTTCGCAGCACCGCGTCGGCGGATTTCATATGGGAATTCAAATT
GTCTTTGCACTATCAATTTCTGATGGACAAAGCATTAGAACTCAACGGAAAAAGAAAG
Protein sequenceShow/hide protein sequence
VALVLMHLDSPEICRLAGVNQLFRSTASADFIWEFKLSLHYQFLMDKALELNGKRK