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MS006766 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006766
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein PP2-A13-like
Genome locationscaffold60:218315..218478
RNA-Seq ExpressionMS006766
SyntenyMS006766
Gene Ontology termsGO:0009611 - response to wounding (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582587.1 F-box protein PP2-A13, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

XP_022147516.1 F-box protein PP2-A13-like [Momordica charantia]2.8e-1583.64Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMHLDP EICKLAGVN LFRG  SADFIW  KLP NYQFLMDKASE DGK K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

XP_022924583.1 F-box protein PP2-A13-like [Cucurbita moschata]2.6e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

XP_022980370.1 F-box protein PP2-A13-like [Cucurbita maxima]2.6e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

XP_023527763.1 F-box protein PP2-A13-like [Cucurbita pepo subsp. pepo]2.6e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

TrEMBL top hitse value%identityAlignment
A0A0A0L7J2 F-box domain-containing protein2.8e-1374.55Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP+EICKLAGVN LFR   SADFIW SKLP NYQFLMDK  E D K++
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

A0A6J1D2L7 F-box protein PP2-A13-like1.4e-1583.64Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMHLDP EICKLAGVN LFRG  SADFIW  KLP NYQFLMDKASE DGK K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

A0A6J1ECW2 F-box protein PP2-A13-like1.3e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

A0A6J1I9B1 F-box protein PP2-A13-like2.4e-1272.73Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN LFR   SADF+W SKLP NYQFL+DKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

A0A6J1IW34 F-box protein PP2-A13-like1.3e-1376.36Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK
        ALVLMH+DP EICKLAGVN +FRG  SADFIW SKLP NYQFLMDKA E + K K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK

SwissProt top hitse value%identityAlignment
Q9CAN4 F-box protein PP2-A112.9e-0747.37Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK--ASEPDGKRK
        AL+L +LDP EIC+ + +N  F G   ADF+W SKLP +Y+ +++K   S PD  RK
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK--ASEPDGKRK

Q9FJ80 F-box protein PP2-A146.7e-0442.55Show/hide
Query:  VLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASE
        + M+++P EIC LA VN  F     +D +W  KLP NY+FL+ +  E
Subjt:  VLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDKASE

Q9LEX0 F-box protein PP2-A131.3e-0756.52Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK
        AL++  LDP EIC+LA +N +FR   SADFIW SKLP NY+ +  K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK

Q9LF92 F-box protein PP2-A155.0e-0757.78Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMD
        A V M+L P EIC LAG+N  FRG  S+D +W  KLP NYQ L+D
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMD

Q9LN77 F-box protein PP2-A122.7e-0545.65Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK
        A+++ +LDP EIC+ + +N  FRG   AD +W SKLP NY+ +++K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK

Arabidopsis top hitse value%identityAlignment
AT1G12710.1 phloem protein 2-A121.9e-0645.65Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK
        A+++ +LDP EIC+ + +N  FRG   AD +W SKLP NY+ +++K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK

AT1G63090.1 phloem protein 2-A112.1e-0847.37Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK--ASEPDGKRK
        AL+L +LDP EIC+ + +N  F G   ADF+W SKLP +Y+ +++K   S PD  RK
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK--ASEPDGKRK

AT3G53000.1 phloem protein 2-A153.5e-0857.78Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMD
        A V M+L P EIC LAG+N  FRG  S+D +W  KLP NYQ L+D
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMD

AT3G61060.1 phloem protein 2-A139.3e-0956.52Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK
        AL++  LDP EIC+LA +N +FR   SADFIW SKLP NY+ +  K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK

AT3G61060.2 phloem protein 2-A139.3e-0956.52Show/hide
Query:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK
        AL++  LDP EIC+LA +N +FR   SADFIW SKLP NY+ +  K
Subjt:  ALVLMHLDPSEICKLAGVN-LFRGVESADFIWVSKLPLNYQFLMDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTCTGGTTCTGATGCATTTGGACCCGTCGGAGATTTGCAAATTGGCCGGAGTCAACCTGTTTCGCGGCGTCGAGTCGGCGGATTTCATATGGGTATCCAAATTGCCTTT
GAACTATCAATTTCTGATGGACAAAGCATCGGAGCCTGACGGAAAAAGAAAG
mRNA sequenceShow/hide mRNA sequence
GCTCTGGTTCTGATGCATTTGGACCCGTCGGAGATTTGCAAATTGGCCGGAGTCAACCTGTTTCGCGGCGTCGAGTCGGCGGATTTCATATGGGTATCCAAATTGCCTTT
GAACTATCAATTTCTGATGGACAAAGCATCGGAGCCTGACGGAAAAAGAAAG
Protein sequenceShow/hide protein sequence
ALVLMHLDPSEICKLAGVNLFRGVESADFIWVSKLPLNYQFLMDKASEPDGKRK