CuGenDBv2

Gene ID	MS006772
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP synthase subunit alpha, chloroplastic
Genome location	scaffold60:263103..263345
RNA-Seq Expression	MS006772
Synteny	MS006772
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function) GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

ANG08318.1 ATP synthase CF1 alpha subunit [Catha edulis]

1.1e-31

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

QGQ56138.1 ATP synthase CF1 alpha subunit [Monimopetalum chinense]

1.1e-31

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

QXJ80081.1 ATP synthase CF1 alpha subunit [Celastrus orbiculatus]

1.1e-31

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

YP_009456046.1 ATP synthase CF1 alpha subunit [Momordica charantia]

1.1e-31

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

YP_009758400.1 ATP synthase CF1 alpha subunit [Salacia amplifolia]

1.1e-31

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

TrEMBL top hits

e value

%identity

Alignment

A0A2H4E741 ATP synthase subunit alpha, chloroplastic

5.3e-32

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

A0A2I6BZW9 ATP synthase subunit alpha, chloroplastic

5.3e-32

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

A0A650BJS6 ATP synthase subunit alpha, chloroplastic

5.3e-32

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

A0A6G8QS81 ATP synthase subunit alpha, chloroplastic

5.3e-32

92.77

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

D3WDB8 ATP synthase subunit alpha, chloroplastic

6.9e-32

91.57

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGI+SRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQGENV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

SwissProt top hits

e value

%identity

Alignment

A0A320 ATP synthase subunit alpha, chloroplastic

3.2e-34

91.57

Show/hide

Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

B1A920 ATP synthase subunit alpha, chloroplastic

3.2e-34

91.57

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

B1NWD5 ATP synthase subunit alpha, chloroplastic

3.2e-34

91.57

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

Q09MJ3 ATP synthase subunit alpha, chloroplastic

3.2e-34

91.57

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

Q2L8Z1 ATP synthase subunit alpha, chloroplastic

3.2e-34

91.57

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALAKPIDGRGE+SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.1e-21

59.76

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKT--GVTTILNQQGEN
        +A+  PIDG+G +S  E R +E  APGI+ R+SV+EP+QTGL A+DS++PI RGQREL+IGDRQTGKT   + TILNQ+  N
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKT--GVTTILNQQGEN

ATCG00120.1 ATP synthase subunit alpha

2.5e-34

89.16

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV
        NALA PIDGRG++SASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPI RGQRELIIGDRQTGKT V   TILNQQG+NV
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVT--TILNQQGENV

ATMG01190.1 ATP synthase subunit 1

7.1e-21

58.54

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Query:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKT--GVTTILNQQGEN
        +A+  PIDG+G +S  E R +E  APGI+ R+SV+EP+QTGL A+DS++PI RGQREL+IG RQTGKT   + TILNQ+  N
Subjt:  NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKT--GVTTILNQQGEN

Sequences

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CDS sequence

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AATGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAGTTTCAGCTTCTGAATCTCGGTTAATTGAATCCCCCGCTCCTGGTATTATTTCGAGACGTTCCGTATATGAGCC
TCTTCAAACAGGACTTATTGCTATTGATTCGATGATTCCTATCGAACGTGGTCAGCGAGAATTAATTATTGGGGACAGGCAGACCGGTAAAACTGGAGTAACCACGATTC
TCAATCAACAAGGGGAAAATGTC

mRNA sequence

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Protein sequence

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NALAKPIDGRGEVSASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIERGQRELIIGDRQTGKTGVTTILNQQGENV

MS006772 (gene) of Bitter gourd (TR) v1 genome