CuGenDBv2

Gene ID	MS006776
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	syndetin isoform X2
Genome location	scaffold60:304703..318544
RNA-Seq Expression	MS006776
Synteny	MS006776
Gene Ontology terms	GO:0032456 - endocytic recycling (biological process) GO:0042147 - retrograde transport, endosome to Golgi (biological process) GO:0005829 - cytosol (cellular component) GO:1990745 - EARP complex (cellular component)
InterPro domains	IPR019515 - Vacuolar protein sorting-associated protein 54, N-terminal IPR040047 - Syndetin

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011654229.1 syndetin isoform X3 [Cucumis sativus]

2.5e-277

79.87

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFK+E YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQ---------------EVCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL
        AEKIQSFFMQEVISETHSAL+D+VQ               ++CF      F      ++  L   + S+  ++      +DS +QTP+MK Q+D Y + L
Subjt:  AEKIQSFFMQEVISETHSALRDIVQ---------------EVCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL

Query:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
        GD+EE T NVSSMG  GI NS+YMD+ D +RESR DSS ASTSGSPWYHLRKD I FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Subjt:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED

Query:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG
        LNVF LAGEAFCGVEAVEFRQKLK VCENYYV FHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TG
Subjt:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG

Query:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS
        MDRSGFLQWLK GNPFLLKLMHTYKEGTPNG  YGE+DGSVG S  R++VSPTK TDNL+NGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNH S
Subjt:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS

Query:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS
        NH +D  TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQL+TTSGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Subjt:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS

Query:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        AS++TFSF+EVTPSPPG+S GYLHGTSFGLK
Subjt:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

XP_022152900.1 syndetin isoform X1 [Momordica charantia]

0.0e+00

91.11

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Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG
        AEKIQSFFMQEVISETHSALRDIVQE               +C       F      ++  L   + S+  ++      +DSDQTPNMKQQDDSYVLNLG
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG

Query:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
        DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Subjt:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL

Query:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
        NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
Subjt:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM

Query:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
        DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
Subjt:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN

Query:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
        HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Subjt:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA

Query:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        SNTTFSFSEVTPSPPGTS GYLHGTSFGLK
Subjt:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

XP_022152901.1 syndetin isoform X2 [Momordica charantia]

0.0e+00

91.11

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG
        AEKIQSFFMQEVISETHSALRDIVQE               +C       F      ++  L   + S+  ++      +DSDQTPNMKQQDDSYVLNLG
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG

Query:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
        DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Subjt:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL

Query:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
        NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
Subjt:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM

Query:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
        DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
Subjt:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN

Query:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
        HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Subjt:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA

Query:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        SNTTFSFSEVTPSPPGTS GYLHGTSFGLK
Subjt:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

XP_038895533.1 syndetin isoform X1 [Benincasa hispida]

2.4e-280

81.3

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRHAVDMQSMLE+LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL
        AEKIQSFFMQEVISETHSAL+DIVQE               +CF      F      ++  L   + S+  ++      +DS +QT +MKQ +D++ +NL
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL

Query:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
        GDTEELT NVSSMG+TGI NSVYMD  D +RESR DSSTASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Subjt:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED

Query:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG
        LNVFILAGEAFCGVEAVEFRQKLK+VCENYYVAFHKQSMHALKMVMEKENWLTLP DTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TG
Subjt:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG

Query:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS
        MDRSGFLQWLK GNPFLLKLMHT KEGTPNG  YGE+DGSVGES  R++ SPTK  DNLANGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNHSS
Subjt:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS

Query:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS
        NH ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQ +T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Subjt:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS

Query:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        AS++TFSF+EVTPSPPGTS GYLHGTSFGLK
Subjt:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

XP_038895534.1 syndetin isoform X2 [Benincasa hispida]

2.4e-280

81.3

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRHAVDMQSMLE+LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL
        AEKIQSFFMQEVISETHSAL+DIVQE               +CF      F      ++  L   + S+  ++      +DS +QT +MKQ +D++ +NL
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDS-DQTPNMKQQDDSYVLNL

Query:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
        GDTEELT NVSSMG+TGI NSVYMD  D +RESR DSSTASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Subjt:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED

Query:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG
        LNVFILAGEAFCGVEAVEFRQKLK+VCENYYVAFHKQSMHALKMVMEKENWLTLP DTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TG
Subjt:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG

Query:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS
        MDRSGFLQWLK GNPFLLKLMHT KEGTPNG  YGE+DGSVGES  R++ SPTK  DNLANGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNHSS
Subjt:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS

Query:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS
        NH ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQ +T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Subjt:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS

Query:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        AS++TFSF+EVTPSPPGTS GYLHGTSFGLK
Subjt:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CG39 syndetin

3.5e-277

79.87

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLNL
        AEKIQSFFMQEVISETHSAL+DIVQE               +CF      F +  L    +   S+             +DS ++TP+MK Q+D+Y + L
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLNL

Query:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
        GD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS ASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Subjt:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED

Query:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG
        LNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TG
Subjt:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG

Query:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS
        MDRSGFLQWL  GNPFLLKL+HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNH S
Subjt:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS

Query:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS
        NH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Subjt:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS

Query:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        AS++TFSF+EVTPSPPG+S GYLHGTSFGLK
Subjt:  ASNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

A0A5A7VC68 Syndetin

2.4e-270

79.68

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQEV----------------CFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLN
        AEKIQSFFMQEVISETHSAL+DIVQEV                CF      F +  L    +   S+             +DS ++TP+MK Q+D+Y + 
Subjt:  AEKIQSFFMQEVISETHSALRDIVQEV----------------CFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLN

Query:  LGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE
        LGD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS ASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE
Subjt:  LGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYE

Query:  DLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNT
        DLNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++T
Subjt:  DLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNT

Query:  GMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHS
        GMDRSGFLQWL  GNPFLLKL+HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNH 
Subjt:  GMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHS

Query:  SNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSP
        SNH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSP
Subjt:  SNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSP

Query:  SASNTTFSFSEVTPSPPGTS
        SAS++TFSF+EVTPSPPG+S
Subjt:  SASNTTFSFSEVTPSPPGTS

A0A5D3CVZ5 Syndetin

4.1e-270

79.64

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Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        +LPVLSELRHAVDMQSMLE LVEEGNYYK   VLSEYLQLLDS SELSVIQ+MSRGVE+WLGR LQKLDSLLIEVCQEFKKE YLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLNL
        AEKIQSFFMQEVISETHSAL+DIVQE               +CF      F +  L    +   S+             +DS ++TP+MK Q+D+Y + L
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGFSVGQLNLYLMSHISL------------IQDS-DQTPNMKQQDDSYVLNL

Query:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
        GD+EE T +VSSMG+TGI +S+YMD+ D  RESR DSS ASTSGSPWYHLRKDAI FVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED
Subjt:  GDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYED

Query:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG
        LNVFILAGEAFCGVEAVEFRQKLK VCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGL+GDGAPLFV+S+G+SSN KV R DKS+S ++TG
Subjt:  LNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTG

Query:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS
        MDRSGFLQWL  GNPFLLKL+HTYKEGTPNG  YGE+DGSVG S  R++ SPTK TDNLANGANTVSEDEDEDLLADFIDEDSQLPSR+SKPKL RNH S
Subjt:  MDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSS

Query:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS
        NH  D+ TAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKG+CQLF VFFYFVYETFGQL+T+SGGKGFPDSLNYKLKTALSRAAQDC+QWIRPHSSSPS
Subjt:  NHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPS

Query:  ASNTTFSFSEVTPSPPGTS
        AS++TFSF+EVTPSPPG+S
Subjt:  ASNTTFSFSEVTPSPPGTS

A0A6J1DF95 syndetin isoform X1

0.0e+00

91.11

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG
        AEKIQSFFMQEVISETHSALRDIVQE               +C       F      ++  L   + S+  ++      +DSDQTPNMKQQDDSYVLNLG
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG

Query:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
        DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Subjt:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL

Query:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
        NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
Subjt:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM

Query:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
        DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
Subjt:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN

Query:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
        HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Subjt:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA

Query:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        SNTTFSFSEVTPSPPGTS GYLHGTSFGLK
Subjt:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

A0A6J1DJ46 syndetin isoform X2

0.0e+00

91.11

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLPVLSELRH VDMQSMLESLVEEGNYYK   VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNYYK---VLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG
        AEKIQSFFMQEVISETHSALRDIVQE               +C       F      ++  L   + S+  ++      +DSDQTPNMKQQDDSYVLNLG
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLI------QDSDQTPNMKQQDDSYVLNLG

Query:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
        DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL
Subjt:  DTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDL

Query:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
        NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM
Subjt:  NVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGM

Query:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
        DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESF RNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN
Subjt:  DRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSRLSKPKLPRNHSSN

Query:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
        HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA
Subjt:  HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQDCDQWIRPHSSSPSA

Query:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        SNTTFSFSEVTPSPPGTS GYLHGTSFGLK
Subjt:  SNTTFSFSEVTPSPPGTSFGYLHGTSFGLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G27900.1 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

9.6e-179

55.16

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLP+L++LRHA  MQS LE LVE+GNY   ++VLSEYLQLLDS+SE S  Q+M+RGVEVWLGR L KLDSLL+ VCQEFK++ Y+ V+DAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-------TPNM--KQQDDSYV-
        AEKIQSFFMQEVISETHS L+ IV E               +C       F      ++  L   + S+  ++  + +       +P++   Q  DS   
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-------TPNM--KQQDDSYV-

Query:  ---------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS
                 L  G     T +      +G  +SV +  +    ESR      S+S SPWY+LRK++ +FVS+TLQRGR+NLWQLTTSRVSVLLSS    S
Subjt:  ---------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS

Query:  TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVS
        TSIHQFLKNYEDL++FILAGEAFCG E V+FR+KLK VCENY+ AFH+QSMHALKMV+EKE W  L PDTVQ ++FAGL+GDGAPL +SS  +S +++  
Subjt:  TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVS

Query:  RKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSR
          DK S+ ++   +RSGF  WLK GNPF  KL H Y+E     +  GE D    +S   + V+P        NG + VSEDE+EDLLADFIDEDSQLP R
Subjt:  RKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSR

Query:  LSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD
               R  SS+   ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVN EFFKGICQLFGVFFYFV++ FGQ NT SGGKG  DS N++LK+ LSR +Q+
Subjt:  LSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD

Query:  CDQWIRPH-SSSPSAS----NTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        C+QWI+PH SSSPS+S    NT  S ++VTP+ P  + G+L G SF LK
Subjt:  CDQWIRPH-SSSPSAS----NTTFSFSEVTPSPPGTSFGYLHGTSFGLK

AT2G27900.2 CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

9.6e-179

55.16

Show/hide

Query:  MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL
        MLP+L++LRHA  MQS LE LVE+GNY   ++VLSEYLQLLDS+SE S  Q+M+RGVEVWLGR L KLDSLL+ VCQEFK++ Y+ V+DAYALIGDVSGL
Subjt:  MLPVLSELRHAVDMQSMLESLVEEGNY---YKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGL

Query:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-------TPNM--KQQDDSYV-
        AEKIQSFFMQEVISETHS L+ IV E               +C       F      ++  L   + S+  ++  + +       +P++   Q  DS   
Subjt:  AEKIQSFFMQEVISETHSALRDIVQE---------------VCFSPSSGGF------SVGQLNLYLMSHISLIQDSDQ-------TPNM--KQQDDSYV-

Query:  ---------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS
                 L  G     T +      +G  +SV +  +    ESR      S+S SPWY+LRK++ +FVS+TLQRGR+NLWQLTTSRVSVLLSS    S
Subjt:  ---------LNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLRKDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCS

Query:  TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVS
        TSIHQFLKNYEDL++FILAGEAFCG E V+FR+KLK VCENY+ AFH+QSMHALKMV+EKE W  L PDTVQ ++FAGL+GDGAPL +SS  +S +++  
Subjt:  TSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQVVSFAGLIGDGAPLFVSSDGSSSNAKVS

Query:  RKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSR
          DK S+ ++   +RSGF  WLK GNPF  KL H Y+E     +  GE D    +S   + V+P        NG + VSEDE+EDLLADFIDEDSQLP R
Subjt:  RKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDEDEDLLADFIDEDSQLPSR

Query:  LSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD
               R  SS+   ND+ TAQTGSSLCLLRSMDKYARLMQKLEIVN EFFKGICQLFGVFFYFV++ FGQ NT SGGKG  DS N++LK+ LSR +Q+
Subjt:  LSKPKLPRNHSSN-HINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTALSRAAQD

Query:  CDQWIRPH-SSSPSAS----NTTFSFSEVTPSPPGTSFGYLHGTSFGLK
        C+QWI+PH SSSPS+S    NT  S ++VTP+ P  + G+L G SF LK
Subjt:  CDQWIRPH-SSSPSAS----NTTFSFSEVTPSPPGTSFGYLHGTSFGLK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTCCGGTATTGAGTGAGCTTCGTCATGCTGTGGACATGCAATCAATGCTCGAATCTCTTGTTGAAGAGGGAAATTATTACAAGGTCCTGTCTGAGTATTTGCAGCT
ATTGGATAGCATTTCAGAGCTTTCAGTAATTCAAGACATGAGCCGTGGCGTAGAAGTTTGGCTGGGAAGAGCCCTGCAAAAGTTGGATTCACTATTGATAGAAGTCTGCC
AGGAGTTCAAGAAGGAGGGTTATTTAACCGTGGTTGATGCCTATGCATTAATAGGGGATGTCTCTGGCCTTGCTGAAAAGATACAAAGCTTTTTTATGCAGGAAGTTATA
TCAGAAACCCATTCTGCCTTGAGAGACATCGTGCAAGAGGTGTGCTTCTCTCCTTCGTCAGGAGGCTTTTCTGTTGGGCAGTTAAATTTGTATCTCATGAGTCATATATC
TTTGATCCAGGATTCTGACCAAACTCCTAATATGAAGCAACAAGATGATAGTTATGTCCTGAATTTAGGAGATACAGAGGAATTGACGACCAATGTCTCTTCAATGGGGA
CTACAGGGATTATGAATTCTGTGTATATGGATGATGATGATCCCGATAGAGAGTCCCGGATGGATAGCAGTACAGCATCAACTAGTGGTTCTCCCTGGTATCATCTGAGA
AAAGATGCTATAAGTTTTGTTTCCCAAACCCTTCAAAGAGGCCGTAAGAACCTTTGGCAACTAACTACTAGTCGTGTGTCAGTACTGCTTTCTTCTGCTGCTGTCTGTTC
AACCAGCATTCACCAATTCTTGAAAAACTATGAAGATCTCAATGTCTTTATTTTGGCTGGAGAAGCCTTCTGTGGAGTTGAAGCAGTTGAGTTTAGGCAAAAGTTGAAGA
GTGTTTGTGAAAACTATTATGTGGCTTTTCATAAGCAGAGTATGCATGCGCTAAAGATGGTTATGGAAAAAGAGAATTGGCTTACACTGCCACCAGATACAGTTCAAGTT
GTTAGTTTTGCTGGACTGATTGGTGATGGGGCACCTTTGTTTGTTTCATCTGATGGTAGCTCATCAAACGCCAAGGTCTCTCGTAAAGACAAATCATCAAGCTTAGTTAA
TACAGGCATGGATAGAAGTGGTTTTTTGCAATGGCTCAAAGGTGGAAATCCATTTTTACTTAAACTCATGCATACTTATAAAGAAGGTACACCAAATGGGGCTTCTTATG
GAGAATTAGATGGAAGTGTTGGTGAAAGTTTTCGTAGGAATAGTGTCTCTCCAACTAAGGGTACAGACAATCTTGCAAATGGTGCGAATACTGTTTCTGAAGATGAAGAC
GAAGATCTTCTTGCTGACTTTATTGATGAAGATAGTCAACTCCCAAGCAGACTTTCAAAACCCAAACTTCCACGAAACCACTCTTCTAATCATATTAATGATGAATTTAC
AGCTCAAACAGGATCATCTCTATGCCTTCTAAGGTCCATGGACAAATATGCAAGGCTTATGCAGAAACTAGAGATAGTGAATGTTGAGTTTTTTAAGGGGATATGCCAGT
TGTTTGGAGTGTTCTTCTATTTTGTATACGAGACTTTTGGTCAGCTTAACACTACTTCTGGTGGAAAAGGCTTCCCTGACTCCCTCAATTATAAGTTGAAGACAGCCTTG
TCCCGTGCTGCTCAGGATTGTGATCAGTGGATCAGACCCCATTCATCTTCCCCATCAGCTTCAAATACGACATTTTCTTTCAGCGAAGTTACCCCAAGTCCTCCTGGCAC
TAGTTTTGGTTACTTGCATGGAACATCTTTTGGTCTCAAGGTGCTAGTTTATTTA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLPVLSELRHAVDMQSMLESLVEEGNYYKVLSEYLQLLDSISELSVIQDMSRGVEVWLGRALQKLDSLLIEVCQEFKKEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVI
SETHSALRDIVQEVCFSPSSGGFSVGQLNLYLMSHISLIQDSDQTPNMKQQDDSYVLNLGDTEELTTNVSSMGTTGIMNSVYMDDDDPDRESRMDSSTASTSGSPWYHLR
KDAISFVSQTLQRGRKNLWQLTTSRVSVLLSSAAVCSTSIHQFLKNYEDLNVFILAGEAFCGVEAVEFRQKLKSVCENYYVAFHKQSMHALKMVMEKENWLTLPPDTVQV
VSFAGLIGDGAPLFVSSDGSSSNAKVSRKDKSSSLVNTGMDRSGFLQWLKGGNPFLLKLMHTYKEGTPNGASYGELDGSVGESFRRNSVSPTKGTDNLANGANTVSEDED
EDLLADFIDEDSQLPSRLSKPKLPRNHSSNHINDEFTAQTGSSLCLLRSMDKYARLMQKLEIVNVEFFKGICQLFGVFFYFVYETFGQLNTTSGGKGFPDSLNYKLKTAL
SRAAQDCDQWIRPHSSSPSASNTTFSFSEVTPSPPGTSFGYLHGTSFGLKVLVYL

MS006776 (gene) of Bitter gourd (TR) v1 genome