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MS006788 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006788
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein At5g49610-like
Genome locationscaffold60:449284..449454
RNA-Seq ExpressionMS006788
SyntenyMS006788
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_017222448.1 PREDICTED: uncharacterized protein LOC108199227 [Daucus carota subsp. sativus]3.1e-0444.64Show/hide
Query:  YVCELFDSKTWSWNHLPDVVVAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
        Y+CE+FDSKTW W     +++    +I   +++ S S HWLLSD  ILAF   T T
Subjt:  YVCELFDSKTWSWNHLPDVVVAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
XP_022154661.1 F-box protein At5g49610-like [Momordica charantia]8.6e-0755Show/hide
Query:  YYVCELFDSKTWSWNHLPDVV---VAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
        Y VCELFDS TW W  L DVV    +G  +  S  V A  SAHWLL D+TILAF F   T
Subjt:  YYVCELFDSKTWSWNHLPDVV---VAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
TrEMBL top hitse value%identityAlignment
A0A175YLS7 FBA_3 domain-containing protein1.5e-0444.64Show/hide
Query:  YVCELFDSKTWSWNHLPDVVVAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
        Y+CE+FDSKTW W     +++    +I   +++ S S HWLLSD  ILAF   T T
Subjt:  YVCELFDSKTWSWNHLPDVVVAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
A0A6J1DPD6 F-box protein At5g49610-like4.2e-0755Show/hide
Query:  YYVCELFDSKTWSWNHLPDVV---VAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
        Y VCELFDS TW W  L DVV    +G  +  S  V A  SAHWLL D+TILAF F   T
Subjt:  YYVCELFDSKTWSWNHLPDVV---VAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACTACGTGTGCGAGCTCTTCGACTCCAAAACCTGGAGTTGGAATCATCTACCAGACGTCGTCGTTGCCGGATCATGCATCATACCCTCCGTTGCTGTTTATGCTTCCGA
CTCCGCTCATTGGCTGCTCAGCGACCGAACCATACTGGCCTTCCATTTCCACACCAGGACA
mRNA sequenceShow/hide mRNA sequence
TACTACGTGTGCGAGCTCTTCGACTCCAAAACCTGGAGTTGGAATCATCTACCAGACGTCGTCGTTGCCGGATCATGCATCATACCCTCCGTTGCTGTTTATGCTTCCGA
CTCCGCTCATTGGCTGCTCAGCGACCGAACCATACTGGCCTTCCATTTCCACACCAGGACA
Protein sequenceShow/hide protein sequence
YYVCELFDSKTWSWNHLPDVVVAGSCIIPSVAVYASDSAHWLLSDRTILAFHFHTRT