; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006794 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006794
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNDR1/HIN1-like protein 10
Genome locationscaffold60:493726..495057
RNA-Seq ExpressionMS006794
SyntenyMS006794
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152938.1 NDR1/HIN1-like protein 10 [Momordica charantia]1.2e-10699.51Show/hide
Query:  MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID
        MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPK PTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID
Subjt:  MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID

Query:  SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK
        SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK
Subjt:  SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK

Query:  CRVDL
        CRVDL
Subjt:  CRVDL

XP_022964992.1 uncharacterized protein At1g08160-like [Cucurbita moschata]6.3e-4750Show/hide
Query:  STTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDS
        S+TT   +        Q     KRT +MRIIGR++L ++ L+GL++VI WL++ PKTP   +E  +VT ++LTDR LNA+++FTIK+ NPN+RA+I +DS
Subjt:  STTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDS

Query:  MRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKKC
        M++T++ +GQ F +T+P+F+  PG QT L P VEV    PFG + D + S+G   +L   A + Y +EKW SKRRSLEIYCD V  LKIN STP DN KC
Subjt:  MRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKKC

Query:  RVDL
        +VDL
Subjt:  RVDL

XP_022970341.1 uncharacterized protein At1g08160-like [Cucurbita maxima]4.8e-4749.53Show/hide
Query:  MSTTTQTSKESSNGGQTQNRKP---------PKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNP
        M   TQ    SS+    +  KP          KRT +MRIIGR++L ++ L+GL++VI WL++ PKTP   +E  +VT ++LTDR LNA+++FTIK+ NP
Subjt:  MSTTTQTSKESSNGGQTQNRKP---------PKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNP

Query:  NRRAAIDIDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN
        N+RA+I +DSM++T++ +GQ F +T+P+F+  PG QT L P VEV    PFG + D + SNG   +L   A + Y +EKW SKRRSLEIYCD V  LKIN
Subjt:  NRRAAIDIDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN

Query:  TSTPLDNKKCRVDL
         STP DN KC+VDL
Subjt:  TSTPLDNKKCRVDL

XP_023520091.1 uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]4.8e-4751.46Show/hide
Query:  STTT--QTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDI
        STT+  +  K SS G Q       KRT +MRIIGR++L ++ L+GL++VI WL++ PKTP   +E  +VT ++LTDR LNA+++FTIK+ NPN+RA+I +
Subjt:  STTT--QTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDI

Query:  DSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNK
        DSM++T++ +GQ F +T+P+F+  PG QT L P VEV    PFG + D + S+G   +L   A + Y +EKW SKRRSLEIYCD V  LKIN STP DN 
Subjt:  DSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNK

Query:  KCRVDL
        KC+VDL
Subjt:  KCRVDL

XP_038895440.1 uncharacterized protein LOC120083674 [Benincasa hispida]1.6e-4247.03Show/hide
Query:  QTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDSMRVT
        + S  S      Q     KRT ++RI GR++LGI+IL+G+ ++I WL++ PKTP   VE+  V  + LTDR L AT+AFT+K+ NPN+RA I +DSM + 
Subjt:  QTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDSMRVT

Query:  VEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGG--LKINTSTPLDNKKCRV
        V  +GQ F S +P+F+  PG QT+   A++     PFG++ + V++ G   DLR  AK+ Y +++WTSK R LEIYC   GG  LK N STP DNKKC V
Subjt:  VEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGG--LKINTSTPLDNKKCRV

Query:  DL
        DL
Subjt:  DL

TrEMBL top hitse value%identityAlignment
A0A1S3CGQ5 uncharacterized protein LOC1035007022.3e-3943.96Show/hide
Query:  STTTQTSKESSNGGQ---TQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAID
        S  TQ    SS+  +    +     KRT ++RI GRT+LG++IL+ ++M+I WL++ P+ P   VET  V  ++LTDR LNAT+AFT+ + NPN++A+I 
Subjt:  STTTQTSKESSNGGQ---TQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAID

Query:  IDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDN
        +DSMR+ V  +G  F S +PSF+  P  +T+L   ++     PFG++ + V+  G   DLR  AK+ Y +E+WTS+ R LE+YCD +  LK N ST  DN
Subjt:  IDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDN

Query:  KKCRVDL
        KKC+VDL
Subjt:  KKCRVDL

A0A5D3CC54 Protein YLS9-like2.3e-3943.96Show/hide
Query:  STTTQTSKESSNGGQ---TQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAID
        S  TQ    SS+  +    +     KRT ++RI GRT+LG++IL+ ++M+I WL++ P+ P   VET  V  ++LTDR LNAT+AFT+ + NPN++A+I 
Subjt:  STTTQTSKESSNGGQ---TQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAID

Query:  IDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDN
        +DSMR+ V  +G  F S +PSF+  P  +T+L   ++     PFG++ + V+  G   DLR  AK+ Y +E+WTS+ R LE+YCD +  LK N ST  DN
Subjt:  IDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDN

Query:  KKCRVDL
        KKC+VDL
Subjt:  KKCRVDL

A0A6J1DG76 NDR1/HIN1-like protein 105.8e-10799.51Show/hide
Query:  MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID
        MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPK PTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID
Subjt:  MSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDID

Query:  SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK
        SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK
Subjt:  SMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKK

Query:  CRVDL
        CRVDL
Subjt:  CRVDL

A0A6J1HJ52 uncharacterized protein At1g08160-like3.0e-4750Show/hide
Query:  STTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDS
        S+TT   +        Q     KRT +MRIIGR++L ++ L+GL++VI WL++ PKTP   +E  +VT ++LTDR LNA+++FTIK+ NPN+RA+I +DS
Subjt:  STTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDS

Query:  MRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKKC
        M++T++ +GQ F +T+P+F+  PG QT L P VEV    PFG + D + S+G   +L   A + Y +EKW SKRRSLEIYCD V  LKIN STP DN KC
Subjt:  MRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKKC

Query:  RVDL
        +VDL
Subjt:  RVDL

A0A6J1I0B9 uncharacterized protein At1g08160-like2.3e-4749.53Show/hide
Query:  MSTTTQTSKESSNGGQTQNRKP---------PKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNP
        M   TQ    SS+    +  KP          KRT +MRIIGR++L ++ L+GL++VI WL++ PKTP   +E  +VT ++LTDR LNA+++FTIK+ NP
Subjt:  MSTTTQTSKESSNGGQTQNRKP---------PKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNP

Query:  NRRAAIDIDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN
        N+RA+I +DSM++T++ +GQ F +T+P+F+  PG QT L P VEV    PFG + D + SNG   +L   A + Y +EKW SKRRSLEIYCD V  LKIN
Subjt:  NRRAAIDIDSMRVTVEYLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN

Query:  TSTPLDNKKCRVDL
         STP DN KC+VDL
Subjt:  TSTPLDNKKCRVDL

SwissProt top hitse value%identityAlignment
Q8VZ13 Uncharacterized protein At1g081603.3e-0626.86Show/hide
Query:  IIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANAL--TDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRF-RSTVPSFSLAPGKQ
        I+   +LG  +L+GL+++I +L + PK   Y VE  +V   A+   D ++NA  ++ IK+ NP +  ++   SMR++  +  Q      +  F   P  +
Subjt:  IIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANAL--TDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRF-RSTVPSFSLAPGKQ

Query:  TLLKPAV--EVFSTSPFG--NLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN-TSTPLD
        T ++  +     + S F   +L         E+++ + A++ Y    + S+RR+L+  C  V    IN TS+ LD
Subjt:  TLLKPAV--EVFSTSPFG--NLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN-TSTPLD

Arabidopsis top hitse value%identityAlignment
AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.3e-0726.86Show/hide
Query:  IIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANAL--TDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRF-RSTVPSFSLAPGKQ
        I+   +LG  +L+GL+++I +L + PK   Y VE  +V   A+   D ++NA  ++ IK+ NP +  ++   SMR++  +  Q      +  F   P  +
Subjt:  IIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANAL--TDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRF-RSTVPSFSLAPGKQ

Query:  TLLKPAV--EVFSTSPFG--NLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN-TSTPLD
        T ++  +     + S F   +L         E+++ + A++ Y    + S+RR+L+  C  V    IN TS+ LD
Subjt:  TLLKPAV--EVFSTSPFG--NLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKIN-TSTPLD

AT2G27260.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.4e-0421.3Show/hide
Query:  KPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRFRST-VPS
        +P  R  I+R +       ++LLGL + I +L++ P+ P  N+ + +V+   +++  ++      ++  NPN + ++  ++    + Y       T +  
Subjt:  KPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVEYLGQRFRST-VPS

Query:  FSLAPGKQTLLKPAVEVFSTSPFGNLNDTVR-----SNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCD
        F      QT++   + V  T   G L D++          E DLR+ + + +    +  +RR + +YCD
Subjt:  FSLAPGKQTLLKPAVEVFSTSPFGNLNDTVR-----SNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTGCAACATGAGCACCACTACACAGACCTCGAAAGAGAGCTCCAATGGCGGCCAAACCCAGAACAGGAAGCCACCAAAACGCACCACCATAATGAGAATCATAGGAAG
AACAATGCTGGGAATTATAATCCTTTTGGGGCTCTCCATGGTCATAAACTGGCTTCTCATCATCCCCAAAACTCCCACTTACAATGTGGAGACTTGCAATGTCACAGCCA
ACGCATTAACAGACAGAAACCTCAACGCCACCCTCGCTTTTACCATCAAAACCTCCAATCCCAACCGGAGAGCCGCCATCGACATTGACTCCATGAGAGTTACGGTGGAA
TACCTCGGCCAGAGGTTTCGCTCCACCGTCCCCTCCTTCTCCCTCGCCCCCGGGAAACAGACCCTCCTCAAGCCCGCCGTCGAGGTTTTCTCCACATCGCCCTTTGGGAA
TCTCAACGACACCGTACGCTCCAACGGGTTCGAAGTCGACCTTCGCCTCGAGGCGAAGATCAGGTACGCTATCGAGAAATGGACATCGAAACGTCGATCGCTGGAGATCT
ACTGTGATTTGGTGGGCGGGCTAAAGATCAACACTTCTACACCCCTTGATAACAAAAAATGCAGAGTGGATCTC
mRNA sequenceShow/hide mRNA sequence
CTCTGCAACATGAGCACCACTACACAGACCTCGAAAGAGAGCTCCAATGGCGGCCAAACCCAGAACAGGAAGCCACCAAAACGCACCACCATAATGAGAATCATAGGAAG
AACAATGCTGGGAATTATAATCCTTTTGGGGCTCTCCATGGTCATAAACTGGCTTCTCATCATCCCCAAAACTCCCACTTACAATGTGGAGACTTGCAATGTCACAGCCA
ACGCATTAACAGACAGAAACCTCAACGCCACCCTCGCTTTTACCATCAAAACCTCCAATCCCAACCGGAGAGCCGCCATCGACATTGACTCCATGAGAGTTACGGTGGAA
TACCTCGGCCAGAGGTTTCGCTCCACCGTCCCCTCCTTCTCCCTCGCCCCCGGGAAACAGACCCTCCTCAAGCCCGCCGTCGAGGTTTTCTCCACATCGCCCTTTGGGAA
TCTCAACGACACCGTACGCTCCAACGGGTTCGAAGTCGACCTTCGCCTCGAGGCGAAGATCAGGTACGCTATCGAGAAATGGACATCGAAACGTCGATCGCTGGAGATCT
ACTGTGATTTGGTGGGCGGGCTAAAGATCAACACTTCTACACCCCTTGATAACAAAAAATGCAGAGTGGATCTC
Protein sequenceShow/hide protein sequence
LCNMSTTTQTSKESSNGGQTQNRKPPKRTTIMRIIGRTMLGIIILLGLSMVINWLLIIPKTPTYNVETCNVTANALTDRNLNATLAFTIKTSNPNRRAAIDIDSMRVTVE
YLGQRFRSTVPSFSLAPGKQTLLKPAVEVFSTSPFGNLNDTVRSNGFEVDLRLEAKIRYAIEKWTSKRRSLEIYCDLVGGLKINTSTPLDNKKCRVDL