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MS006799 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006799
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold60:528161..528472
RNA-Seq ExpressionMS006799
SyntenyMS006799
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050078.1 hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]1.4e-2357.69Show/hide
Query:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA
        +++ KL L+  VC+AILA +      AA P DP+  EK SL  C SF+SEATKCV+DV+K AVAPHP CCKA + LNDCS  FLK IP  +M LIK +CA
Subjt:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA

Query:  LWGI
        LWG+
Subjt:  LWGI

KAE8653017.1 hypothetical protein Csa_004564 [Cucumis sativus]8.3e-2459.46Show/hide
Query:  SATKLAL-LLLVCIAILAPA--------AAAVPIDPYRTEK-FSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIK
        SATKL L L+L+CIAILA +         AA P  P  TE+ FSLF C+S V +ATKCV+DV+   VAPHP CC+AI+ LNDCSS+FLKDIP  +M L+K
Subjt:  SATKLAL-LLLVCIAILAPA--------AAAVPIDPYRTEK-FSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIK

Query:  TVCALWGISIP
        +VCA WG+SIP
Subjt:  TVCALWGISIP

KAE8653021.1 hypothetical protein Csa_004567 [Cucumis sativus]6.3e-2458.65Show/hide
Query:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA
        +++ KL L+ LVCIAILA +      A  P DP+  E+FSL  C SF+SEAT C+VDV+K AVAPHP CCKA + LNDCSS FLK IP  +M LIK +CA
Subjt:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA

Query:  LWGI
        LWG+
Subjt:  LWGI

KAG6589812.1 hypothetical protein SDJN03_15235, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2465.98Show/hide
Query:  KLALLLLVCIAILAPAAAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGISI
        KLA   LVCIAILA  A A   DP+  E FSLF C S VSE TKCVVDV+K+AVAPHP CC+AI+ LN CSS FLKD+P  +M LIKTVCALWG+ +
Subjt:  KLALLLLVCIAILAPAAAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGISI

TYK10345.1 hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa]4.9e-2460.78Show/hide
Query:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI
        TKL L+LLVCIAILA +  A P         +E FSLF C+SFV +ATKCV+DV+K AVAPHP CC+AI+ L+DCSS FLKDIP  +M L+K++CA WG+
Subjt:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI

Query:  SI
        SI
Subjt:  SI

TrEMBL top hitse value%identityAlignment
A0A5A7U2D8 Uncharacterized protein9.9e-2359.43Show/hide
Query:  TKLALLLLVCIAILAPA--------AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA
        TKL L+LLVCIAILA +        AAA PI    ++ FSLF C+SFV  ATK V+DV+K AVAPHP CC+AI+ L+DCSS FLKDIP ++M L+K++CA
Subjt:  TKLALLLLVCIAILAPA--------AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA

Query:  LWGISI
         WG+SI
Subjt:  LWGISI

A0A5A7U483 Uncharacterized protein6.8e-2457.69Show/hide
Query:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA
        +++ KL L+  VC+AILA +      AA P DP+  EK SL  C SF+SEATKCV+DV+K AVAPHP CCKA + LNDCS  FLK IP  +M LIK +CA
Subjt:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA

Query:  LWGI
        LWG+
Subjt:  LWGI

A0A5A7U9B0 Uncharacterized protein4.4e-2358.82Show/hide
Query:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI
        TKL L+L VCIAILA +  A P         +E FSLF C+SFV +ATKCV+DV+K  VAPHP CC+AI  L+DCSS FLKDIP  +M L+K++CA WG+
Subjt:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI

Query:  SI
        SI
Subjt:  SI

A0A5D3CFS6 Uncharacterized protein2.4e-2460.78Show/hide
Query:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI
        TKL L+LLVCIAILA +  A P         +E FSLF C+SFV +ATKCV+DV+K AVAPHP CC+AI+ L+DCSS FLKDIP  +M L+K++CA WG+
Subjt:  TKLALLLLVCIAILAPAAAAVP----IDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGI

Query:  SI
        SI
Subjt:  SI

A0A5D3CG41 Uncharacterized protein2.0e-2356.73Show/hide
Query:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA
        +++ KL L+  VC+AILA +      AA P DP+  E+ SL  C SF+SEATKCV+DV+K AVAPHP CCKA + LNDCS  FLK IP  +M LIK +CA
Subjt:  LSATKLALLLLVCIAILAPA-----AAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCA

Query:  LWGI
        LWG+
Subjt:  LWGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCAGTTATCAGCCACCAAGTTGGCTCTTCTACTCCTAGTCTGCATAGCCATTCTAGCACCAGCAGCAGCGGCGGTGCCTATCGATCCATACCGGACCGAGAAGTTCTC
TTTGTTCCGGTGCGTATCGTTTGTCTCGGAGGCGACGAAATGTGTGGTGGATGTGGTGAAGAAGGCGGTGGCTCCTCACCCTCCTTGCTGCAAAGCCATTGCTAGCCTCA
ACGACTGCTCCTCCTCCTTTCTCAAAGACATTCCCGTCGAGGAAATGGGTTTGATTAAGACCGTTTGCGCTTTATGGGGCATTTCAATTCCT
mRNA sequenceShow/hide mRNA sequence
GTGCAGTTATCAGCCACCAAGTTGGCTCTTCTACTCCTAGTCTGCATAGCCATTCTAGCACCAGCAGCAGCGGCGGTGCCTATCGATCCATACCGGACCGAGAAGTTCTC
TTTGTTCCGGTGCGTATCGTTTGTCTCGGAGGCGACGAAATGTGTGGTGGATGTGGTGAAGAAGGCGGTGGCTCCTCACCCTCCTTGCTGCAAAGCCATTGCTAGCCTCA
ACGACTGCTCCTCCTCCTTTCTCAAAGACATTCCCGTCGAGGAAATGGGTTTGATTAAGACCGTTTGCGCTTTATGGGGCATTTCAATTCCT
Protein sequenceShow/hide protein sequence
VQLSATKLALLLLVCIAILAPAAAAVPIDPYRTEKFSLFRCVSFVSEATKCVVDVVKKAVAPHPPCCKAIASLNDCSSSFLKDIPVEEMGLIKTVCALWGISIP