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MS006803 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006803
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function, DUF584
Genome locationscaffold60:554027..554545
RNA-Seq ExpressionMS006803
SyntenyMS006803
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462513.1 PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]4.7e-6477.59Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATGKSYFSRSKFRFLP  DG D       D+ F+ DESDLFNSP SG SPE RRP S +RISKR+S   VD GDRSV   +AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD F D+DGD  D GDEFE+ RFRVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_022964829.1 uncharacterized protein LOC111464817 [Cucurbita moschata]4.7e-6476.97Show/hide
Query:  MAT-GKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN
        MAT G +YFSRSKFRFLP ADG D R     DS+FELDESDLFNSP S ASPE RR VS +RISKR+SA  VD  DRSV    AASLPVN+PDWSKILRN
Subjt:  MAT-GKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN

Query:  EYIENRRDSFDDDGDEAD----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        EYIENRRD FDDD D+ +    GG +FEDGRFRVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  EYIENRRDSFDDDGDEAD----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_022970343.1 uncharacterized protein LOC111469336 [Cucurbita maxima]3.8e-6678.09Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATG +YFSRSKFRFLP ADG D R     DS+FELDESDLFNSPRS ASPE RR VS +RISKR+SA  VD  DRSV    AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD FDDD D+ D     GG +FEDGRFRVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_023519114.1 uncharacterized protein LOC111782574 [Cucurbita pepo subsp. pepo]6.5e-6677.53Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATG +YFSRSKFRFLP ADG D R     DS+FELDESDLFNSPRS ASPE RR VS +RISKR+SA  VD  DRSV    AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD FDD+ D+ D     GG +FEDGRFRVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

XP_038894808.1 uncharacterized protein LOC120083221 [Benincasa hispida]2.4e-6878.74Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATG+SYFSRSKFRFLP  DG D      GD++F+ DESDLFNSP SG SPE RRP +  RISKR+S  VVDAGDR+V   +AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDDDGDE-ADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD+FDDD DE  DGGD+FE+GRFRVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSFDDDGDE-ADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

TrEMBL top hitse value%identityAlignment
A0A0A0LSF7 Uncharacterized protein4.7e-6275.86Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATGKSYFSRSKFRFL   DG D       D+ F+ DESDLFNSP SG SPE RRP S +RISKR+S   VD GDRSV   +AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YI+NRRD F D+DGD  D GDE E+ RFRVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A1S3CH53 uncharacterized protein LOC1035008462.3e-6477.59Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATGKSYFSRSKFRFLP  DG D       D+ F+ DESDLFNSP SG SPE RRP S +RISKR+S   VD GDRSV   +AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD F D+DGD  D GDEFE+ RFRVPPHEFLA+TRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSF-DDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1FJG2 uncharacterized protein LOC1114444601.6e-5772.25Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATGKSYFSRSKFRFLP ++  + R   CGD +FE+DESDLFNSPR G        VS  RISK +SAKVVDAGD SV   AA  LPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD F+   +EA+ GDE E+ RFRVPPHEF+ARTR+ASFSV EGIGRTLKGRDLSRVRDAIW KTGFED
Subjt:  YIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1HPB6 uncharacterized protein LOC1114648172.3e-6476.97Show/hide
Query:  MAT-GKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN
        MAT G +YFSRSKFRFLP ADG D R     DS+FELDESDLFNSP S ASPE RR VS +RISKR+SA  VD  DRSV    AASLPVN+PDWSKILRN
Subjt:  MAT-GKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN

Query:  EYIENRRDSFDDDGDEAD----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        EYIENRRD FDDD D+ +    GG +FEDGRFRVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  EYIENRRDSFDDDGDEAD----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

A0A6J1I3L6 uncharacterized protein LOC1114693361.9e-6678.09Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MATG +YFSRSKFRFLP ADG D R     DS+FELDESDLFNSPRS ASPE RR VS +RISKR+SA  VD  DRSV    AASLPVN+PDWSKILRNE
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        YIENRRD FDDD D+ D     GG +FEDGRFRVPPHEFLA+TRIASFSVHEG+GRTLKGRDLSRVRDAIWQKTGFED
Subjt:  YIENRRDSFDDDGDEAD-----GGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5842.4e-2646.86Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE
        MAT K Y+ R   RF       D+   A  D  FELDE DLFN   +G+        S   I+   +         S +  AA+SLPVNVPDWSKIL +E
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNE

Query:  YIENRRDSFDD--DGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
            R+ S ++  DGDE   G    +G  RVPPHE LA  R+ASFSVHEG GRTLKGRDLSRVR+ I++  G ED
Subjt:  YIENRRDSFDD--DGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT3G45210.1 Protein of unknown function, DUF5844.7e-3048.84Show/hide
Query:  ATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNEY
        AT KSY+ R   RFLP     DR     GDS FE DESDL+ S RS +   RR+ +++ R S   +               A+SLP+NV +WSKIL    
Subjt:  ATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNEY

Query:  IENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
         ENR+   +DD    DGG+       ++PPHE+LA+TR+ASFSVHEGIGRTLKGRD+SRVR+AI +KTGF D
Subjt:  IENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT4G04630.1 Protein of unknown function, DUF5847.1e-1843.06Show/hide
Query:  ELDESDLFNSPRSG--ASPERRRPVSAARISKRMSAKVVD-AGDRSVAVAAAASLPVNVPDWSKILRNEYIENRRDSFDDDGDEADGGDEFEDGRFRVPP
        E  E D+++  R G  +SPE + P S    S   S+   +    + V+    +S P+NVPDWSK+  +   ++ R S       AD  DE +DG   VPP
Subjt:  ELDESDLFNSPRSG--ASPERRRPVSAARISKRMSAKVVD-AGDRSVAVAAAASLPVNVPDWSKILRNEYIENRRDSFDDDGDEADGGDEFEDGRFRVPP

Query:  HEF----LARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF
        HE+    LART+I+SFS+ EG+GRTLKGRDLS+VR+A+  KTGF
Subjt:  HEF----LARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGF

AT5G03230.1 Protein of unknown function, DUF5844.7e-3041.71Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFN--SPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILR
        MA+ K +F + K+ +       + +     +++FE DESD+ N    +   S + +R +S +R+ +R   K  D+G+R   +    SLPVN+PDWSKIL+
Subjt:  MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFN--SPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILR

Query:  NEYIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        +EY  +     D D D+ D  D  + GR  +PPHE+LAR R +SF+VHEGIG T KGRDL R+R+AIW+K GF+D
Subjt:  NEYIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED

AT5G60680.1 Protein of unknown function, DUF5846.6e-4055.17Show/hide
Query:  MATGKSYFSRSKFRFLPGADGADRRG-AACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN
        MATGKSY++R  +RFL    G D+       DS  E DESDLFN P    SP+  R +S+   S R   K  +    + + AAA+SLPVNVPDWSKILR 
Subjt:  MATGKSYFSRSKFRFLPGADGADRRG-AACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRN

Query:  EYIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED
        EY +NRR S +D+ D+    D+ EDG   +PPHEFLA+TR+ASFSVHEG+GRTLKGRDLSRVR+AI++K GF+D
Subjt:  EYIENRRDSFDDDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGTAAGAGTTACTTCTCTCGTTCAAAGTTCCGGTTTCTTCCCGGCGCCGACGGGGCGGACCGCCGTGGCGCCGCCTGCGGTGACTCCATCTTCGAGCTCGA
CGAGTCCGACCTCTTCAACTCGCCGCGCTCCGGCGCCTCACCGGAGCGCCGGAGACCTGTTTCCGCCGCGCGAATCTCGAAGCGGATGTCGGCGAAGGTCGTCGACGCCG
GAGACCGGAGCGTGGCGGTCGCGGCGGCGGCGTCGCTGCCGGTCAACGTTCCAGACTGGTCGAAGATCCTGAGGAACGAGTACATCGAGAATCGGAGAGACAGCTTCGAC
GATGACGGCGATGAGGCCGACGGCGGCGATGAGTTCGAGGACGGACGATTTAGGGTTCCGCCGCACGAATTTCTGGCGAGGACGAGGATCGCTTCGTTCTCAGTCCACGA
AGGAATCGGAAGAACGCTGAAAGGAAGAGATCTGAGTAGAGTCCGAGATGCGATTTGGCAGAAAACAGGTTTCGAAGAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGTAAGAGTTACTTCTCTCGTTCAAAGTTCCGGTTTCTTCCCGGCGCCGACGGGGCGGACCGCCGTGGCGCCGCCTGCGGTGACTCCATCTTCGAGCTCGA
CGAGTCCGACCTCTTCAACTCGCCGCGCTCCGGCGCCTCACCGGAGCGCCGGAGACCTGTTTCCGCCGCGCGAATCTCGAAGCGGATGTCGGCGAAGGTCGTCGACGCCG
GAGACCGGAGCGTGGCGGTCGCGGCGGCGGCGTCGCTGCCGGTCAACGTTCCAGACTGGTCGAAGATCCTGAGGAACGAGTACATCGAGAATCGGAGAGACAGCTTCGAC
GATGACGGCGATGAGGCCGACGGCGGCGATGAGTTCGAGGACGGACGATTTAGGGTTCCGCCGCACGAATTTCTGGCGAGGACGAGGATCGCTTCGTTCTCAGTCCACGA
AGGAATCGGAAGAACGCTGAAAGGAAGAGATCTGAGTAGAGTCCGAGATGCGATTTGGCAGAAAACAGGTTTCGAAGAT
Protein sequenceShow/hide protein sequence
MATGKSYFSRSKFRFLPGADGADRRGAACGDSIFELDESDLFNSPRSGASPERRRPVSAARISKRMSAKVVDAGDRSVAVAAAASLPVNVPDWSKILRNEYIENRRDSFD
DDGDEADGGDEFEDGRFRVPPHEFLARTRIASFSVHEGIGRTLKGRDLSRVRDAIWQKTGFED